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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Migut.N01024.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
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Family | bZIP | ||||||||
Protein Properties | Length: 200aa MW: 21584.7 Da PI: 10.4588 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 50.2 | 5.8e-16 | 120 | 176 | 4 | 60 |
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklk 60 +++rr++kNRe+A rsR+RK+a++ eLe v++Le+ N L ke el+ e ++ Migut.N01024.1.p 120 QQKQRRMIKNRESAARSRERKQAYTVELESLVAQLEEDNAGLLKEEAELNRERYTQL 176 689**************************************9999999988876555 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 2.5E-14 | 117 | 181 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 11.323 | 119 | 171 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 6.7E-15 | 119 | 178 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14707 | 8.56E-18 | 121 | 168 | No hit | No description |
SuperFamily | SSF57959 | 4.0E-11 | 121 | 173 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 1.2E-14 | 122 | 172 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 124 | 139 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 200 aa Download sequence Send to blast |
MRSGDANRVV AGGWRDFMSG GAPNNTAMVL DDLIAKARAA NEEDVGVLAM ATRSAPPPPP 60 AVGGAFGIET VMMNPAAQFA SAACVRSGFG VEFGSGMAAV SGKGKRRAAV EEAPLDKATQ 120 QKQRRMIKNR ESAARSRERK QAYTVELESL VAQLEEDNAG LLKEEAELNR ERYTQLMENV 180 IPVTEKRRPK KVLRRVRSI* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Migut.N01024.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012839757.1 | 1e-141 | PREDICTED: G-box-binding factor 4-like | ||||
TrEMBL | A0A2G9GIN5 | 4e-75 | A0A2G9GIN5_9LAMI; Uncharacterized protein | ||||
STRING | Migut.N01024.1.p | 1e-141 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA2771 | 24 | 52 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G44080.1 | 3e-31 | bZIP family protein |
Link Out ? help Back to Top | |
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Phytozome | Migut.N01024.1.p |