PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.N00204.1.p
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family CPP
Protein Properties Length: 671aa    MW: 74144.3 Da    PI: 5.2855
Description CPP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.N00204.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCR50.54e-16406444240
               TCR   2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 
                       ++k+CnCkkskClk+YCeCfaag++C e C C dC+Nk 
  Migut.N00204.1.p 406 SCKRCNCKKSKCLKLYCECFAAGVYCVEPCACIDCFNKP 444
                       799**********************************96 PP
2TCR52.41.1e-16491529139
               TCR   1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNk 39 
                       ++k+gCnCkks ClkkYCeC+++g+ Cs +C+Ce+CkN 
  Migut.N00204.1.p 491 RHKRGCNCKKSGCLKKYCECYQSGVGCSINCRCEGCKNA 529
                       589***********************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM011141.3E-18405446IPR033467Tesmin/TSO1-like CXC domain
PROSITE profilePS5163437.138406531IPR005172CRC domain
PfamPF036385.8E-12408443IPR005172CRC domain
SMARTSM011148.5E-18491532IPR033467Tesmin/TSO1-like CXC domain
PfamPF036383.8E-12493529IPR005172CRC domain
Sequence ? help Back to Top
Protein Sequence    Length: 671 aa     Download sequence    Send to blast
MDYTPERSKN NQIATSITKF EDSPVFSFLN SLSPIKPVKS THITQTINSL TFASLPSVFT  60
SPHATSLRES RFLQRHQISD QSNAEFSTDD GNMVYTDKTE KLDEYKENLD PRVSNICAEN  120
YNVVEYGCSS SSTFIQIAEE SSGSGLYRDE MSLQVISQTD QAKESAPSDW ESLISDGSDL  180
FTFESPNIDR DAYSKPVDPS TIFYTSIKNA IQNEVVSGKR FGQANEQPQN LSTQPEEAID  240
MTENAEASGL IPCEKTDFEH VTGLYRGVRR RCLVFELGGS RIKRLDNNDS CPDSSNMQNS  300
EGNTSSNQTL APTKLVNDSS CNAFPGIGLH LNALTTTSRR LLVGPTSFSD NMHASTSGQE  360
DYANGIPPLE DSFQESDYME NVEMNQTSPK KKSRRTEQVV EGGDQSCKRC NCKKSKCLKL  420
YCECFAAGVY CVEPCACIDC FNKPIHEDTV LATRKQIESR NPLAFTPKVI KGSDSLSEIG  480
DDFSKTPASA RHKRGCNCKK SGCLKKYCEC YQSGVGCSIN CRCEGCKNAF GRKDGSSCTD  540
HEFEEDETET NEIEQSMDSA LHATPLNTKR KIIEPFPSKQ KPPRSSSSIG SSSGKSNFFP  600
PPPKFSQHFE TVNEDELLSD FLELNSPIKL SSPNRKRVSP PHGLEGLRSS RKLILQSISS  660
FPSLTSNNLQ *
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5fd3_A2e-1940852812120Protein lin-54 homolog
5fd3_B2e-1940852812120Protein lin-54 homolog
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.N00204.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012854031.10.0PREDICTED: protein tesmin/TSO1-like CXC 2
TrEMBLA0A022Q6T60.0A0A022Q6T6_ERYGU; Uncharacterized protein
STRINGMigut.N00204.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA24672345
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G14770.11e-111TESMIN/TSO1-like CXC 2