PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Migut.M02021.1.p

Common Name

MIMGU_mgv1a024583mg

Organism

Mimulus guttatus

Taxonomic ID

4155

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe

Family

MYB_related

Protein Properties

Length: 463aa MW: 52655 Da PI: 5.7974

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Migut.M02021.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	29.8	1.4e-09	401	453	3	47
SS-HHHHHHHHHHHHHTTTT.....-HHHHHHHHT...TTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg.....tWktIartmg...kgRtlkqcksrwqky 47 WT E++ + av+ lG + +W++Ia + + Rt+++++ +w++ Migut.M02021.1.p 401 LWTSAEEKAFETAVENLGVEkpgsiHWRAIATEYSdtiQDRTAEDLRYKWRNM 453 5**************************************************95 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.10.10.60	2.1E-8	394	460	IPR009057	Homeodomain-like
PROSITE profile	PS51294	9.081	394	458	IPR017930	Myb domain
SuperFamily	SSF46689	4.64E-9	396	455	IPR009057	Homeodomain-like
SMART	SM00717	9.2E-7	398	456	IPR001005	SANT/Myb domain
Pfam	PF00249	1.8E-7	401	453	IPR001005	SANT/Myb domain
CDD	cd11660	8.09E-7	402	455	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 463 aa Download sequence Send to blast
MYNVSSMDID ADIAHWMLDY LLRQPLEEWK LSALIDALPL SNTDTNTRLE RLILLKQLEY 60 KAARFPVSRS TLVLFEQLEE LDSRQGNMKV SDGMKHAYCA VAVNWTMEGA ICQIEFFHAV 120 TGLMERIEMM EKHVERNGAL CSEELSEWIK DIKASMWNAH LFKSIMKKVE GLDVLDAVRV 180 FVKGEREKMG PPLLELVKKL KDDEYVMEFL RGKAKIVDPD SGDENAMGPS YETSCKSPMS 240 EEVRIVRRAL HKSLLDLEAV VKDPLPEALK YSAEVMAKFM ARTGGRNMAQ EENMNQDTVK 300 ENAESMAGTS AREMPGKENH LELNQIDVVG DGNVQATTGI DKGNVRRPSL MERNKSARTS 360 EWTEYEPEEE QGSRLPSPRT TKNAPNKPGK ENGKDRRIRR LWTSAEEKAF ETAVENLGVE 420 KPGSIHWRAI ATEYSDTIQD RTAEDLRYKW RNMTKAKAKR YG*

Sequence ? help Back to Top

Protein Sequence Length: 463 aa Download sequence Send to blast

MYNVSSMDID ADIAHWMLDY LLRQPLEEWK LSALIDALPL SNTDTNTRLE RLILLKQLEY  60
KAARFPVSRS TLVLFEQLEE LDSRQGNMKV SDGMKHAYCA VAVNWTMEGA ICQIEFFHAV  120
TGLMERIEMM EKHVERNGAL CSEELSEWIK DIKASMWNAH LFKSIMKKVE GLDVLDAVRV  180
FVKGEREKMG PPLLELVKKL KDDEYVMEFL RGKAKIVDPD SGDENAMGPS YETSCKSPMS  240
EEVRIVRRAL HKSLLDLEAV VKDPLPEALK YSAEVMAKFM ARTGGRNMAQ EENMNQDTVK  300
ENAESMAGTS AREMPGKENH LELNQIDVVG DGNVQATTGI DKGNVRRPSL MERNKSARTS  360
EWTEYEPEEE QGSRLPSPRT TKNAPNKPGK ENGKDRRIRR LWTSAEEKAF ETAVENLGVE  420
KPGSIHWRAI ATEYSDTIQD RTAEDLRYKW RNMTKAKAKR YG*

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Migut.M02021.1.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_012829686.1	0.0	PREDICTED: uncharacterized protein LOC105950864
TrEMBL	A0A022RXD5	0.0	A0A022RXD5_ERYGU; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA3774	24	39

Link Out ? help Back to Top
Phytozome	Migut.M02021.1.p