PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Migut.M01997.1.p | ||||||||
Common Name | MIMGU_mgv11b012866mg | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
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Family | MYB_related | ||||||||
Protein Properties | Length: 159aa MW: 18177.2 Da PI: 9.347 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 33.7 | 8.2e-11 | 97 | 150 | 3 | 48 |
SS-HHHHHHHHHHHHHTTTT.....-HHHHHHHHT...TTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg.....tWktIartmg...kgRtlkqcksrwqkyl 48 WT E++ l av+ lG + +W+tIa + + Rt+++++ +w++ + Migut.M01997.1.p 97 LWTSAEEKALETAVENLGVEkpgsiHWRTIATEYSdtiQDRTAEDLRYKWRNMM 150 6**************************************************975 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51294 | 11.298 | 90 | 154 | IPR017930 | Myb domain |
Gene3D | G3DSA:1.10.10.60 | 2.2E-10 | 90 | 156 | IPR009057 | Homeodomain-like |
SuperFamily | SSF46689 | 1.22E-10 | 92 | 151 | IPR009057 | Homeodomain-like |
SMART | SM00717 | 4.8E-7 | 94 | 152 | IPR001005 | SANT/Myb domain |
Pfam | PF00249 | 3.5E-8 | 97 | 149 | IPR001005 | SANT/Myb domain |
CDD | cd11660 | 9.57E-8 | 98 | 151 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 159 aa Download sequence Send to blast |
MAGTSAREMP EGKNKNQDPG KENHVKLNQI DVDGDGNVQA TTSIDKGNVR RPSLMERNKS 60 ARTSEWTEYE PEEETTKNAP LNKPEKENGK NRRVRRLWTS AEEKALETAV ENLGVEKPGS 120 IHWRTIATEY SDTIQDRTAE DLRYKWRNMM KAKEKRYG* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Migut.M01997.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012829686.1 | 1e-77 | PREDICTED: uncharacterized protein LOC105950864 | ||||
TrEMBL | A0A022RT08 | 1e-111 | A0A022RT08_ERYGU; Uncharacterized protein |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA3774 | 24 | 39 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G07540.1 | 5e-06 | TRF-like 2 |
Link Out ? help Back to Top | |
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Phytozome | Migut.M01997.1.p |