PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.M01993.1.p
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family MYB_related
Protein Properties Length: 516aa    MW: 58257 Da    PI: 6.4608
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.M01993.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding32.61.9e-10448496146
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHH CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqk 46 
                       r+rWT+ E+  l  av++ G g+Wk+   +     k+Rt+ +++++w++
  Migut.M01993.1.p 448 RLRWTPLEEHTLMAAVREIGEGHWKAMHTKYSdvfKHRTDGDLRDKWRN 496
                       89**********************************************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129414.317443502IPR017930Myb domain
Gene3DG3DSA:1.10.10.601.6E-11443500IPR009057Homeodomain-like
SuperFamilySSF466896.06E-12445499IPR009057Homeodomain-like
SMARTSM007178.4E-6447500IPR001005SANT/Myb domain
PfamPF002496.7E-7448497IPR001005SANT/Myb domain
CDDcd116603.69E-12450499No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009901Biological Processanther dehiscence
GO:0010152Biological Processpollen maturation
GO:0043067Biological Processregulation of programmed cell death
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 516 aa     Download sequence    Send to blast
MDIDEDSANW ILEFYLRQPL EERTLTSLIG ALPLSNTNTR LKKLILLKTL EYQVACFSIS  60
ESTLVLLEQL EEIEFRQGNV KVSDEMKHAY CAVAVECTIK GTNSNIFRFY DNARRLWRKR  120
IGSMQKLVGN GALCSEELSL WKEYIEAAVW DESLFESIVK KGEGLNALDA VSVFLRGEWD  180
RMGPPFLEFA AAKLQDDEHL MEILGVGSSD VDTVKEAPSH HLEDVGNVGY EKKNNIRMKL  240
RPRPLSVRRY RGKAKLVDPG PDDVNAMELS CERRSKSPMS EEVRNVREAL DRSSLDLRAV  300
VKDPLPDALR IAAEAMAGTS ARNMAAGDKN MHQDTLKRKA EAMAGTSARN MAAGEKNKNQ  360
DPVKENHVES NRVDVDGDGD VQVSTGINVG NVRRPSLMER NKSARTYEWS ESIDEPEDDQ  420
AARLPSPMAE IIAALNRPGN ENGKRRKRLR WTPLEEHTLM AAVREIGEGH WKAMHTKYSD  480
VFKHRTDGDL RDKWRNMNKD LSKLDGRPYE VPSHI*
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00052PBMTransfer from AT1G15720Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.M01993.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012829725.10.0PREDICTED: uncharacterized protein LOC105950897
TrEMBLA0A022RXD51e-145A0A022RXD5_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA37742439
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G15720.17e-09TRF-like 5