PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.M01820.1.p
Common NameMIMGU_mgv1a006892mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family C2H2
Protein Properties Length: 440aa    MW: 47400.3 Da    PI: 9.8828
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.M01820.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H215.93.6e-05206228223
                       EETTTTEEESSHHHHHHHHHH.T CS
           zf-C2H2   2 kCpdCgksFsrksnLkrHirt.H 23 
                       +C++Cg++F  ++ L++H  + H
  Migut.M01820.1.p 206 TCHKCGEHFIKWEALESHHLSkH 228
                       7*****************99877 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE patternPS000280207228IPR007087Zinc finger, C2H2
SuperFamilySSF563991.73E-23230438No hitNo description
Gene3DG3DSA:3.90.228.102.0E-9232416IPR012317Poly(ADP-ribose) polymerase, catalytic domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003950Molecular FunctionNAD+ ADP-ribosyltransferase activity
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 440 aa     Download sequence    Send to blast
MGEKKKDTPA TVWFSLKKSL HCKSEPSDVH NPKTRKQLTA ILTRKTGRSG CSRSIANLKD  60
VIHGSKRHLE RPPSCSPRSI GSSEFLNPIA HEVILSNSRC ELKITGFGGF HDGFSGGDSG  120
GGGGGGGGGS TYVGTLRPGT PGPGGHPTMH YFNPSFKNSA ATPPRKTAAA LLAEGRDGFG  180
GGGGGGNGLL PSQKRASFDK ESNGVTCHKC GEHFIKWEAL ESHHLSKHAV TELVEGDSSR  240
KIVEIICRSS WLKSENHSVR IDRVLKVHNM QKTLVRFEDY REAVKIKASK LPKKHPRCLA  300
DGNELLRFHG TTIACTLGMN GSSSLCISDK CCVCRIIRNG FSNKREIKGG VGVFTTSTSG  360
RAFECIEMLD NDVSIRKALI VCRVIAGRVH RPLENIQEMA SQTGFDSLAG KVGMYSNIEE  420
LYLLNAKALL PCFVVICKT*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1118129SGGGGGGGGGGS
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.M01820.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012827570.10.0PREDICTED: uncharacterized protein LOC105948867
TrEMBLA0A022PUI40.0A0A022PUI4_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA22442235
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27240.11e-163C2H2 family protein