 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Migut.M01582.1.p |
| Common Name | MIMGU_mgv1a023131mg |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
|
| Family |
C2H2 |
| Protein Properties |
Length: 379aa MW: 41833.1 Da PI: 8.4913 |
| Description |
C2H2 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Migut.M01582.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | zf-C2H2 | 12.3 | 0.00053 | 131 | 152 | 2 | 23 |
EETTTTEEESSHHHHHHHHHHT CS
zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23
+C+ Cg+ F + +L H+r+H
Migut.M01582.1.p 131 TCSLCGRGFLSMKSLFGHMRSH 152
6********************9 PP
|
| 2 | zf-C2H2 | 14.7 | 8.7e-05 | 279 | 301 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS
zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23
ykC+ C +sF+++ L H+++H
Migut.M01582.1.p 279 YKCSSCERSFTTHQALGGHMSSH 301
9********************99 PP
|
| Protein Features
? help Back to Top |
 |
| Database |
Entry ID |
E-value |
Start |
End |
InterPro ID |
Description |
| SMART | SM00355 | 0.31 | 63 | 85 | IPR015880 | Zinc finger, C2H2-like |
| Pfam | PF13912 | 6.4E-8 | 63 | 85 | IPR007087 | Zinc finger, C2H2 |
| SuperFamily | SSF57667 | 2.23E-7 | 64 | 85 | No hit | No description |
| PROSITE pattern | PS00028 | 0 | 65 | 85 | IPR007087 | Zinc finger, C2H2 |
| SuperFamily | SSF57667 | 2.23E-7 | 125 | 152 | No hit | No description |
| SMART | SM00355 | 0.091 | 130 | 152 | IPR015880 | Zinc finger, C2H2-like |
| PROSITE profile | PS50157 | 9.993 | 130 | 157 | IPR007087 | Zinc finger, C2H2 |
| Pfam | PF13912 | 5.6E-5 | 132 | 152 | IPR007087 | Zinc finger, C2H2 |
| PROSITE pattern | PS00028 | 0 | 132 | 152 | IPR007087 | Zinc finger, C2H2 |
| SuperFamily | SSF57667 | 2.29E-5 | 278 | 305 | No hit | No description |
| PROSITE profile | PS50157 | 10.887 | 279 | 306 | IPR007087 | Zinc finger, C2H2 |
| SMART | SM00355 | 0.025 | 279 | 301 | IPR015880 | Zinc finger, C2H2-like |
| Pfam | PF13912 | 1.9E-7 | 279 | 302 | IPR007087 | Zinc finger, C2H2 |
| PROSITE pattern | PS00028 | 0 | 281 | 301 | IPR007087 | Zinc finger, C2H2 |
| Sequence ? help Back to Top |
| Protein Sequence Length: 379 aa
Download sequence Send
to blast |
MANEQENEAE SLPVKKNKQK SDLLHLWVNL KIPKQEQQQE ERGADIIIED DQTIGCKNNT 60
TARVCSICQA TFGSGKALGG HMRVHFRRAA AAANKKQNPK LQPPTTTTFK KEKKKKIASD 120
QNQKLPVKKP TCSLCGRGFL SMKSLFGHMR SHPNREWRGI HPPSNASVDL TGSLSGWAVT 180
ARRGRQAAST ASSSEVSTSD EDHQLHQAAA CLMMLSQSGG EKPETAKNHV FEKEVVEEEE 240
ARTKRKRKKV KLCDLVPPLM DDDDKKKVAV AAAVVVDKYK CSSCERSFTT HQALGGHMSS 300
HNRSNHNNNI NLIINNNNNN ISMLAKNEDL VCNDYPYPQV VEEETTNKGG GLSSNVVMEF 360
DLNEAPPPSD DGEFCSSW*
|
