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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Migut.M01521.1.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
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Family |
NF-YC |
Protein Properties |
Length: 184aa MW: 21019.8 Da PI: 6.5132 |
Description |
NF-YC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Migut.M01521.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NF-YC | 172.7 | 3.9e-54 | 28 | 132 | 1 | 102 |
NF-YC 1 qlksfwekq...iekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifd 90
ql++fw++q i+++tdfknh+lPlarikki+kadedv+misaeaPv+++kace+fileltlrsw++++enkrrtl+k+diaaa++rtd+fd
Migut.M01521.1.p 28 QLHAFWANQlreINQTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWINTDENKRRTLQKNDIAAAISRTDVFD 120
799******98899******************************************************************************* PP
NF-YC 91 flvdivprdelk 102
flvdi+prdelk
Migut.M01521.1.p 121 FLVDIIPRDELK 132
*********975 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 184 aa
Download sequence Send
to blast |
MPAGTISSPA SLAHDHHRHL VRSQQRKQLH AFWANQLREI NQTTDFKNHS LPLARIKKIM 60 KADEDVRMIS AEAPVIFAKA CEMFILELTL RSWINTDENK RRTLQKNDIA AAISRTDVFD 120 FLVDIIPRDE LKEEGLGVTE SAAVPFYYVS SQNHPIDEQH RQALPFVTWQ PQEEPPQQQP 180 SDS*
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Functional Description ? help
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Source |
Description |
UniProt | Stimulates the transcription of various genes by recognizing and binding to a CCAAT motif in promoters. {ECO:0000250}. |
Publications
? help Back to Top |
- Ding Y, et al.
Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444] - Li S, et al.
HEAT-INDUCED TAS1 TARGET1 Mediates Thermotolerance via HEAT STRESS TRANSCRIPTION FACTOR A1a-Directed Pathways in Arabidopsis. Plant Cell, 2014. 26(4): p. 1764-1780 [PMID:24728648] - Mei X, et al.
Identification and characterization of paternal-preferentially expressed gene NF-YC8 in maize endosperm. Mol. Genet. Genomics, 2015. 290(5): p. 1819-31 [PMID:25851237] - Baud S, et al.
Deciphering the Molecular Mechanisms Underpinning the Transcriptional Control of Gene Expression by Master Transcriptional Regulators in Arabidopsis Seed. Plant Physiol., 2016. 171(2): p. 1099-112 [PMID:27208266] - Zhao H, et al.
The Arabidopsis thaliana Nuclear Factor Y Transcription Factors. Front Plant Sci, 2016. 7: p. 2045 [PMID:28119722]
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