PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.M01263.1.p
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family GeBP
Protein Properties Length: 401aa    MW: 43527.5 Da    PI: 9.2647
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.M01263.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF573119.91.3e-37175270297
            DUF573   2 lfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskk 94 
                       lfqrlwse+Dei++L+G+ d++ k++++p +++++f++f+kk+++++v+++ql++K+rrLKkK+ +++kk k gk+ sfs++h+qk++elskk
  Migut.M01263.1.p 175 LFQRLWSEDDEIAILKGMTDYTLKKNSDPLANMNGFHDFIKKNLHVDVTRTQLSDKVRRLKKKYVNNKKKEKGGKDRSFSNPHEQKAYELSKK 267
                       79******************************************************************************************* PP

            DUF573  95 iWg 97 
                       +Wg
  Migut.M01263.1.p 268 VWG 270
                       **8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045045.7E-34176270IPR007592Protein of unknown function DUF573
Sequence ? help Back to Top
Protein Sequence    Length: 401 aa     Download sequence    Send to blast
MAKNREPEKT VESSESHEEE DDDDSSEEVG SHESDSEPEQ TQVTKKPSSS TPAATLKKAQ  60
PPSSSKPQKQ LPASSSSGED ESGSESDSDS DGPDPKVKPL ATKPMDSSQK SNAAARKPGS  120
KSAASDLVTP AKSAAAKRPA EEKETEAKDS KKAKKKATEP ESSAKKSTDD SKKQLFQRLW  180
SEDDEIAILK GMTDYTLKKN SDPLANMNGF HDFIKKNLHV DVTRTQLSDK VRRLKKKYVN  240
NKKKEKGGKD RSFSNPHEQK AYELSKKVWG NDTAKENGVE KIVTTPTPTP TPKANGTAAK  300
KTPAAAAKAA AIVAKAEEEA VVAVKKDVQN LSPATLYADG GSVESNILRM GEVMFASGKW  360
TDREKEWNRL KLEEVAIIQR HLEIKTAQVK LVLDGLKSDE *
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1231243RRLKKKYVNNKKK
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.M01263.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012848750.10.0PREDICTED: mediator-associated protein 1-like
TrEMBLA0A2Z7D2M77e-94A0A2Z7D2M7_9LAMI; Mediator-associated protein 1
STRINGMigut.M01263.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA30421947
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00390.16e-18DNA-binding storekeeper protein-related transcriptional regulator