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Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Migut.M01170.1.p |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
|
| Family |
NAC |
| Protein Properties |
Length: 323aa MW: 35634.6 Da PI: 7.6226 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Migut.M01170.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 168.6 | 2.1e-52 | 13 | 140 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93
lppGfrFhPtdeelvv+yLkk++++ +l++ +i+e+d+yk++Pw+Lp+k++ +e+ewyfFs+r++ky++g+r+nra++sgyWkatg+dk++l
Migut.M01170.1.p 13 LPPGFRFHPTDEELVVHYLKKRAASAPLPV-AIIAELDLYKYDPWELPSKASFGEQEWYFFSRRERKYPNGERPNRAATSGYWKATGTDKPIL 104
79****************************.88***************988899*************************************** PP
NAM 94 sk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
++ + ++vg+kk Lvfy g+ pkg k++W+mheyrl
Migut.M01170.1.p 105 TAnGAQTVGVKKALVFYGGKPPKGIKSNWIMHEYRL 140
9956778***************************98 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 323 aa
Download sequence Send
to blast |
MESNSAGNNH PRLPPGFRFH PTDEELVVHY LKKRAASAPL PVAIIAELDL YKYDPWELPS 60
KASFGEQEWY FFSRRERKYP NGERPNRAAT SGYWKATGTD KPILTANGAQ TVGVKKALVF 120
YGGKPPKGIK SNWIMHEYRL VDGNSAAKKT PGIAFIGNKT SSRLDDWVLC RIFKKSNSGT 180
TRPVEESMQS SPINNGYHNS IPAAMLSGNG FAIPGNPLRS DSFPEDVSLS SQYWNGMVIQ 240
PVAGNNGKPF PTSNNDEDDN MNPSSCSQIS DEDQHGNLSF ISLLNNYQQF SQTFQQNSSL 300
VHSQGEGNGI LDQSCQLPTS YF*
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1ut4_A | 4e-69 | 13 | 179 | 17 | 169 | NO APICAL MERISTEM PROTEIN |
| 1ut4_B | 4e-69 | 13 | 179 | 17 | 169 | NO APICAL MERISTEM PROTEIN |
| 1ut7_A | 4e-69 | 13 | 179 | 17 | 169 | NO APICAL MERISTEM PROTEIN |
| 1ut7_B | 4e-69 | 13 | 179 | 17 | 169 | NO APICAL MERISTEM PROTEIN |
| 3swm_A | 5e-69 | 13 | 179 | 20 | 172 | NAC domain-containing protein 19 |
| 3swm_B | 5e-69 | 13 | 179 | 20 | 172 | NAC domain-containing protein 19 |
| 3swm_C | 5e-69 | 13 | 179 | 20 | 172 | NAC domain-containing protein 19 |
| 3swm_D | 5e-69 | 13 | 179 | 20 | 172 | NAC domain-containing protein 19 |
| 3swp_A | 5e-69 | 13 | 179 | 20 | 172 | NAC domain-containing protein 19 |
| 3swp_B | 5e-69 | 13 | 179 | 20 | 172 | NAC domain-containing protein 19 |
| 3swp_C | 5e-69 | 13 | 179 | 20 | 172 | NAC domain-containing protein 19 |
| 3swp_D | 5e-69 | 13 | 179 | 20 | 172 | NAC domain-containing protein 19 |
| 4dul_A | 4e-69 | 13 | 179 | 17 | 169 | NAC domain-containing protein 19 |
| 4dul_B | 4e-69 | 13 | 179 | 17 | 169 | NAC domain-containing protein 19 |
| Search in ModeBase |
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Transcription factor of the NAC family. May be associated with anther development and pollen production (Probable). Required for normal seed development and morphology (PubMed:18849494). {ECO:0000269|PubMed:18849494, ECO:0000305|PubMed:21107887}. |
