PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.M01068.1.p
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family TCP
Protein Properties Length: 280aa    MW: 31570.4 Da    PI: 9.3646
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.M01068.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP90.53.6e-2872154366
               TCP   3 gkkdrhskihTkvg.gRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt..................s 66 
                       g+kd+hsk++T+ g  RdRR Rls ++a++f+d+qd+LG+d++sk+++WL+++ak ai++l                     +
  Migut.M01068.1.p  72 GRKDKHSKVCTASGtTRDRRLRLSPKTAIQFYDVQDRLGYDRPSKAVDWLMNEAKSAIDALLLHpppppppvplppphdiydN 154
                       79**********9846*********************************************9885555555555554444440 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF036343.3E-2672134IPR005333Transcription factor, TCP
PROSITE profilePS5136928.31873132IPR017887Transcription factor TCP subgroup
Sequence ? help Back to Top
Protein Sequence    Length: 280 aa     Download sequence    Send to blast
METTTRNKHN TNAFQESPHH QQDFSISSLS GGAGVHTPDR IMQVGFTSAS SSRKRKKPAA  60
DVIQVRSGGG GGRKDKHSKV CTASGTTRDR RLRLSPKTAI QFYDVQDRLG YDRPSKAVDW  120
LMNEAKSAID ALLLHPPPPP PPVPLPPPHD IYDNPVYSFD CFPPLSSSSC CSEFQVLPIV  180
DETREEDSVL EHIYHHHQAF YTWNHNNSRS QISDRETMFS TQREPLQSIH NYPIITPNYS  240
PPFPVRTPFV NSATTSIHPH RLQFRLQQLR ISSLNQVRK*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5zkt_A5e-1678132154Putative transcription factor PCF6
5zkt_B5e-1678132154Putative transcription factor PCF6
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
15256RKRKK
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.M01068.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012848535.11e-160PREDICTED: transcription factor TCP3-like
TrEMBLA0A022QKF11e-158A0A022QKF1_ERYGU; Uncharacterized protein
STRINGMigut.M01068.1.p0.0(Erythranthe guttata)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G53230.14e-26TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 3