 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Migut.M01037.1.p |
| Common Name | LOC105968871, MIMGU_mgv1a010659mg |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
|
| Family |
Trihelix |
| Protein Properties |
Length: 307aa MW: 34339.7 Da PI: 5.5715 |
| Description |
Trihelix family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Migut.M01037.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | trihelix | 51.6 | 2.5e-16 | 24 | 114 | 1 | 86 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.....rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86
+Wt++ + +L++a ++ +l+rg+l++++W+ev++++ + ++ +r+ +qCk++++ l+k+yk +k+ + +ss +p+f +le
Migut.M01037.1.p 24 CWTQEATSTLVDAWGRRYLDLNRGNLRQKDWQEVADVVnahhgHTKKTRRTDVQCKNRIDTLKKKYKVEKAKITDSGGAASSPWPFFPRLE 114
8*************************************9999888999**********************999998899999******997 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 307 aa
Download sequence Send
to blast |
MGDLTESSTP QAPASRQVPF REDCWTQEAT STLVDAWGRR YLDLNRGNLR QKDWQEVADV 60
VNAHHGHTKK TRRTDVQCKN RIDTLKKKYK VEKAKITDSG GAASSPWPFF PRLEYLIGSN 120
LNKTQGKVSP SPMPLASYTP PLCLPAPPLA VPLPYRNTRT PAVFSPPILP QKRPMPSPAV 180
EESYFRKNYS AMAAAAAAAA AEDEAEEDDG ELDGDEAEGS EDRAAEEEEV GETGMRRLAK 240
AIESFGEIFE KVESMKQRQM IELEKQRMQF AKDLEVQRMQ LFMDTQIQLQ KIKQAKRSGS 300
SDDIYS*
|
| Best hit in Arabidopsis thaliana ? help
Back to Top |
| Hit ID |
E-value |
Description |
| AT3G58630.1 | 2e-59 | sequence-specific DNA binding transcription factors |
