PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.M00891.1.p
Common NameMIMGU_mgv1a005762mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family TCP
Protein Properties Length: 482aa    MW: 50976.6 Da    PI: 7.5724
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.M00891.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP126.43.1e-39842452135
               TCP   2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec....eaesssssasnsssg.. 88 
                        g+kdrhsk+ T++g+RdRRvRls+++a++f+dLqd+LG+d++sk++eWLl++a ++i el+  +s+ + ++    + e++ss+a++   +  
  Migut.M00891.1.p  84 SGGKDRHSKVLTSKGLRDRRVRLSVNTAIQFYDLQDRLGYDQPSKAVEWLLKAAATSISELPPMTSPFP-DTpkqlSGEKRSSTAGS---Dql 172
                       689************************************************************944443.22222222222222222...123 PP

               TCP  89 .........................kaaksaakskksqksaasalnlak.esrakarararertrekmriknk 135
                                                +  ks+a+s++s++s+ s l+l++ esr kar+ra+er +ek + k++
  Migut.M00891.1.p 173 gldsaevdmdggavgggdpnyshhhQLTKSSACSSNSENSKGSGLSLSRsESRIKARERAKERVAEKEKEKDN 245
                       4667777788888889999999985555555599999999999***********************9998854 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF036341.4E-4185242IPR005333Transcription factor, TCP
PROSITE profilePS5136931.68686144IPR017887Transcription factor TCP subgroup
PROSITE profilePS513709.68222241IPR017888CYC/TB1, R domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009637Biological Processresponse to blue light
GO:0009965Biological Processleaf morphogenesis
GO:0030154Biological Processcell differentiation
GO:0045962Biological Processpositive regulation of development, heterochronic
GO:1903508Biological Processpositive regulation of nucleic acid-templated transcription
GO:2000306Biological Processpositive regulation of photomorphogenesis
Sequence ? help Back to Top
Protein Sequence    Length: 482 aa     Download sequence    Send to blast
MEVDEIPRKY PKISNGNRRP DSTKIGHALK MDEQYPDEEE EGENNRDAGG GGGVVRVGGV  60
DLGGGVGRFY GWPSSRIVRV SRASGGKDRH SKVLTSKGLR DRRVRLSVNT AIQFYDLQDR  120
LGYDQPSKAV EWLLKAAATS ISELPPMTSP FPDTPKQLSG EKRSSTAGSD QLGLDSAEVD  180
MDGGAVGGGD PNYSHHHQLT KSSACSSNSE NSKGSGLSLS RSESRIKARE RAKERVAEKE  240
KEKDNESPHV SSLNNPISQT TSFTELLSGG INSSTNGGGG GGGGSSVHQN PNMNESNFFL  300
KSPRQQWSST PMDYFNTGLL GPPGTRSGQM HLAANPFTSV ASQMFSVAGD HQPELHHFSF  360
VPDHLAPDVN AAAGGNNSSS GGGGGDYNLN FTISSSANSS GLAGFNRGTL QSNSSSPSML  420
PHLQRFSDGS PPSFFVSTAA PVENHHQFLS GYDAAGRLQL CYGDAHANNG RHSGQKGKGK  480
N*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5zkt_A3e-2391145155Putative transcription factor PCF6
5zkt_B3e-2391145155Putative transcription factor PCF6
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00006PBMTransfer from 493022Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.M00891.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012842244.10.0PREDICTED: transcription factor TCP2-like isoform X1
TrEMBLA0A022QZI80.0A0A022QZI8_ERYGU; Uncharacterized protein
STRINGMigut.M00891.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA24642252
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30210.23e-38TCP family protein