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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Migut.M00776.1.p |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
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| Family |
HD-ZIP |
| Protein Properties |
Length: 193aa MW: 21040.6 Da PI: 9.0525 |
| Description |
HD-ZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Migut.M00776.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 53.9 | 3.1e-17 | 16 | 70 | 3 | 57 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS
Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57
++ ++++eq++ Le+ F +++ e++ +LA++lg++ rq+ +W+qN+Ra++k+
Migut.M00776.1.p 16 QKKRLSQEQVRLLEASFDAAKKLEPEHKFQLARQLGVPPRQIAIWYQNKRARWKN 70
56789************************************************95 PP
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| 2 | HD-ZIP_I/II | 108.3 | 5.5e-35 | 16 | 107 | 2 | 93 |
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93
+k+rls+eqv+lLE sF++ +kLepe+K +lar+Lg+ prq+a+W+qn+RAR+k++ lE d+ +L+ +++a ++e+erLe++v++Lr elk+
Migut.M00776.1.p 16 QKKRLSQEQVRLLEASFDAAKKLEPEHKFQLARQLGVPPRQIAIWYQNKRARWKNQSLELDCGSLQVRLEAAEAEKERLERQVASLRGELKR 107
79*************************************************************************************99986 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0009637 | Biological Process | response to blue light |
| GO:0009646 | Biological Process | response to absence of light |
| GO:0005634 | Cellular Component | nucleus |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 193 aa
Download sequence Send
to blast |
MNNLPQNPKN HSHRAQKKRL SQEQVRLLEA SFDAAKKLEP EHKFQLARQL GVPPRQIAIW 60
YQNKRARWKN QSLELDCGSL QVRLEAAEAE KERLERQVAS LRGELKRAQD SLSGFRQLAA 120
AQAPPVSSLS STCCDEGGGS SSLNDDVGCS ANWANGGGGG GAGDALQFEE LYACLMLARS 180
GAKRLINENG QR*
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