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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Migut.M00262.1.p |
Common Name | LOC105953803, MIMGU_mgv1a008379mg |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
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Family |
Trihelix |
Protein Properties |
Length: 376aa MW: 42741.6 Da PI: 8.4356 |
Description |
Trihelix family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Migut.M00262.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | trihelix | 46.6 | 9.3e-15 | 57 | 147 | 1 | 86 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.....rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86
+W+++ +++Li+a +l+rg+l++++W++v++++ ++ +++r+ +qCk++++ +k+yk +k ++ + + +st+p+f++l+
Migut.M00262.1.p 57 CWSEEATRTLIDAWGAHYLDLNRGNLRQKHWQAVADAVnalhgASFKLRRTDIQCKNRIDTTKKKYKIEKSKVSQSNGRYVSTWPHFQSLD 147
7*************************************999999999***********************99999999999*******997 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 376 aa
Download sequence Send
to blast |
MSSQPTPSPP PSSTTDPQIS DDDDRLAPPS PGKREVSSEP PPTATRTTPV FPSREDCWSE 60 EATRTLIDAW GAHYLDLNRG NLRQKHWQAV ADAVNALHGA SFKLRRTDIQ CKNRIDTTKK 120 KYKIEKSKVS QSNGRYVSTW PHFQSLDSLI GDSFSKTTAT TSHTRNLRRR VSPSPEFSPS 180 PSEPPIHRRK NSPARRDHPE KDPAPSQTLR IPWSVPVGPR SKRTGPGSVT ERNFSVMAAA 240 AAAMEAEELY EKEEEDEEED DYNNELDDYE ECGRRRRQPL LPEVGMKRKR KEAVEDEAAV 300 AEDGYRSLAE AIARLGEIYK KVEEAKQRQM VEMEKQRMQF AKDLEIQRMK VFMESQVHLE 360 KLKRNSKHNS QSSYL*
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Nucleic Localization
Signal ? help
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 |
No. |
Start |
End |
Sequence |
1 | 274 | 290 | RRRQPLLPEVGMKRKRK |
Best hit in Arabidopsis thaliana ? help
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Hit ID |
E-value |
Description |
AT3G58630.1 | 1e-36 | sequence-specific DNA binding transcription factors |