PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Migut.M00256.1.p | ||||||||
Common Name | LOC105953781, MIMGU_mgv1a026524mg | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
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Family | bHLH | ||||||||
Protein Properties | Length: 258aa MW: 28403.1 Da PI: 6.1532 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 35.5 | 1.8e-11 | 53 | 99 | 3 | 54 |
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 r+h+ +ErrRR+riN +++Lr+l+P K++Ka+ L ++v+ +k+L Migut.M00256.1.p 53 RNHSLAERRRRERINAHLATLRTLIPGT-----VKMDKAALLGEVVNRVKEL 99 58*************************8.....7************999988 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50888 | 15.212 | 50 | 99 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 3.9E-9 | 53 | 99 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 1.66E-10 | 53 | 101 | No hit | No description |
Gene3D | G3DSA:4.10.280.10 | 3.3E-13 | 53 | 101 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SuperFamily | SSF47459 | 1.3E-12 | 54 | 102 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 1.3E-10 | 56 | 105 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd04873 | 3.21E-6 | 151 | 220 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 258 aa Download sequence Send to blast |
MEYFKINVDD GICDNYSSKL VLDNERGELV RAAVVKSGRA KVGNADKALV ALRNHSLAER 60 RRRERINAHL ATLRTLIPGT VKMDKAALLG EVVNRVKELR RSMVEATNGA LVPTEVDEVI 120 VEQHKDENPN NCKPSSVSIR ASLCCDFTHE LLSDLRQALD ETLPLNANIT RAEIATMGSR 180 MVNVFLISGQ NDATNNAEDI GDQESQLLIT SVRQALLSVL DKYYASEEFS SGNIVPTKRR 240 RVSPFDSSSS SSLGDMW* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 58 | 63 | ERRRRE |
2 | 237 | 241 | KRRRV |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Migut.M00256.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012832914.1 | 0.0 | PREDICTED: transcription factor bHLH30-like | ||||
TrEMBL | A0A022RMF9 | 0.0 | A0A022RMF9_ERYGU; Uncharacterized protein | ||||
STRING | Migut.M00256.1.p | 0.0 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA11989 | 21 | 23 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G68810.1 | 1e-27 | bHLH family protein |
Link Out ? help Back to Top | |
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Phytozome | Migut.M00256.1.p |
Entrez Gene | 105953781 |