PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.L02020.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family Trihelix
Protein Properties Length: 314aa    MW: 36605.6 Da    PI: 8.1397
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.L02020.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix73.24.4e-2339122186
          trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                       +W+ +e+++L+ +r +++ ++ ++k+kk lWe +s +m+++g +r+p qCk+kw+nl +ryk ++++++   + +++++p++++++
  Migut.L02020.1.p  39 QWSIHETRDLLMFRADLDPNFMETKRKKLLWELISTRMKDKGHNRNPLQCKCKWKNLVTRYKGCETTDEA--EVVRQQFPFYNEMQ 122
                       7*******************************************************************98..577889******97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd122031.93E-2238103No hitNo description
PfamPF138372.7E-1839123No hitNo description
PROSITE profilePS500906.8064096IPR017877Myb-like domain
Sequence ? help Back to Top
Protein Sequence    Length: 314 aa     Download sequence    Send to blast
MDHGQWSQLH HSPSYAAAAG DFVMSSINDT GGGGDRFPQW SIHETRDLLM FRADLDPNFM  60
ETKRKKLLWE LISTRMKDKG HNRNPLQCKC KWKNLVTRYK GCETTDEAEV VRQQFPFYNE  120
MQTIFSARMQ RTMWLEAGGG GGASSSKKKG VVHHQFSSDE DDDLENEDIS IQGEKKGRGA  180
KRKRKTVMKG RTASSCGGEL GNSIVNGVRE MMEDFMKHEM EIEIQWLKCN EEREEKRRVK  240
EMEWRQTMEV LQNERMMIET RWRENEEERK IREEIRSEKR DALITALLNK LSTTQEGSFR  300
FKSVILVKYM LCE*
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.L02020.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012850212.10.0PREDICTED: trihelix transcription factor GT-3b
TrEMBLA0A022QDA60.0A0A022QDA6_ERYGU; Uncharacterized protein (Fragment)
STRINGMigut.L02020.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA41872343
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38250.14e-49Trihelix family protein