PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.L01938.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family Dof
Protein Properties Length: 388aa    MW: 42194.8 Da    PI: 9.9677
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.L01938.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof120.75.4e-38108167362
            zf-Dof   3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 
                       e+alkcprC+stntkfCy+nnyslsqPr+fCk+CrryWt+GGalr vPvGgg+r+nk+ss
  Migut.L01938.1.p 108 ETALKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRSVPVGGGCRRNKRSS 167
                       6789*****************************************************986 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
ProDomPD0074785.0E-3791165IPR003851Zinc finger, Dof-type
PfamPF027013.6E-32110165IPR003851Zinc finger, Dof-type
PROSITE profilePS5088429.292111165IPR003851Zinc finger, Dof-type
PROSITE patternPS013610113149IPR003851Zinc finger, Dof-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 388 aa     Download sequence    Send to blast
MCDTTKTFTK EKEGKKNQRI NTRMDFSSIP AYLDSSNWHL QHQNHQIIGI GGNSNPLLPP  60
PTRPAGHAQP PPPPPLPPQP HGGGSAAGSI RPGSMSERAR MANIPMPETA LKCPRCESTN  120
TKFCYFNNYS LSQPRHFCKT CRRYWTRGGA LRSVPVGGGC RRNKRSSKST TSKSPASSDR  180
QTTTSSSTST VSTNNGTTTT TTNTANILGL TPQLPPLRFL SPLSQLTDNF AGEMGLNNYT  240
GISAPAVGPN EMNFHNIGGI NEPWRMQQVQ QFPFFGGLNL DSGINYQFHG GDLGFGGGEM  300
SHHHQQQQQV RAAPKLSSSF LSQLASVKME DNNRELSLSR QLLMAGSINN NDQWINNNNN  360
NAENTSANNN WTDLSSFSSS STSNPLQ*
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00295DAPTransfer from AT2G37590Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.L01938.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012850428.10.0PREDICTED: dof zinc finger protein DOF2.4-like
TrEMBLA0A022QD340.0A0A022QD34_ERYGU; Uncharacterized protein
STRINGMigut.L01938.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA19172463
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G02460.12e-48Dof family protein