PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.L01743.1.p
Common NameLOC105956737, MIMGU_mgv1a005731mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family Trihelix
Protein Properties Length: 474aa    MW: 51461.8 Da    PI: 6.9793
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.L01743.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix59.21e-1890176186
          trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm..rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                       +W++  + +L+ea++e+  +l+rg+l++ +Weev++ +  r++   +s +qCk+k +nl+kryk ++++ +++   s s++p+++q+e
  Migut.L01743.1.p  90 EWSDTAIACLLEAYSEKFVQLNRGNLRGRDWEEVAATVseRSENQMKSVEQCKNKVDNLKKRYKLERHRLSNG-GVSASHWPWYKQME 176
                       5*************************************555556688************************99.566679*******8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138377.4E-2288178No hitNo description
Gene3DG3DSA:3.40.1160.108.4E-66222466IPR001048Aspartate/glutamate/uridylate kinase
HamapMF_01220_B32.262232467IPR015963Uridylate kinase, bacteria
SuperFamilySSF536332.62E-52233466IPR001048Aspartate/glutamate/uridylate kinase
CDDcd042543.48E-113235467No hitNo description
PfamPF006961.7E-16236446IPR001048Aspartate/glutamate/uridylate kinase
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006221Biological Processpyrimidine nucleotide biosynthetic process
GO:0046939Biological Processnucleotide phosphorylation
GO:0005737Cellular Componentcytoplasm
GO:0033862Molecular FunctionUMP kinase activity
Sequence ? help Back to Top
Protein Sequence    Length: 474 aa     Download sequence    Send to blast
MASCDDDFSL IDDHQNPNSA QPSTATATHT PPYQINHYDQ DSDPFDSEPD PHSISGKRLI  60
DRDDIHSGTS KRTRLPSSGG SGDYRKDREE WSDTAIACLL EAYSEKFVQL NRGNLRGRDW  120
EEVAATVSER SENQMKSVEQ CKNKVDNLKK RYKLERHRLS NGGVSASHWP WYKQMEQIVG  180
SSLAAKAAAE EEKSSGGGAP SYPAKQPKRL GAVTSSPVGQ ISSMKLKPTN TLRWRRVVFR  240
ISGSALAGSP PTNIDPKVAM MIAREVSMAC HVGVEVAIVV GGRNFFCGDT WVTSTGFDRC  300
TAYQIGMMAT VMNSVLLQSS LEKLGVHTRV QSAFSMPEIS EPYSRQRAIR HLEKGRVVIF  360
GGIGAGTGNP LFSTDTAAAL RASDIHADVV LKGANADGVY VCDSRNDSLA AEHISFRELA  420
NRGAFPMDMM AVTVCEENGI PVGVFNIHEP GNISRALCGE RVGLLIDQTG PIS*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ek5_A6e-582324667239Uridylate kinase
3ek5_B6e-582324667239Uridylate kinase
3ek5_C6e-582324667239Uridylate kinase
3ek5_D6e-582324667239Uridylate kinase
3ek5_E6e-582324667239Uridylate kinase
3ek5_F6e-582324667239Uridylate kinase
3ek6_A6e-582324667239Uridylate kinase
3ek6_B6e-582324667239Uridylate kinase
3ek6_C6e-582324667239Uridylate kinase
3ek6_D6e-582324667239Uridylate kinase
3ek6_E6e-582324667239Uridylate kinase
3ek6_F6e-582324667239Uridylate kinase
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00340DAPTransfer from AT3G10030Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.L01743.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012836082.10.0PREDICTED: uncharacterized protein LOC105956737
TrEMBLA0A022RI710.0A0A022RI71_ERYGU; Uncharacterized protein
STRINGMigut.L01743.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA87282427
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G10030.10.0Trihelix family protein