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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Migut.L01697.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
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Family | MYB_related | ||||||||
Protein Properties | Length: 789aa MW: 87538.1 Da PI: 6.464 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 26.5 | 1.5e-08 | 92 | 134 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT +E+e + a +q+G++ +++I ++++ + q++ +++ + Migut.L01697.1.p 92 AWTRQEEESFFAALRQYGKN-FEKITSRVQ-SKNKDQVRYYYYRL 134 6*****************99.*********.***********976 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF46689 | 3.14E-11 | 84 | 139 | IPR009057 | Homeodomain-like |
PROSITE profile | PS51293 | 14.121 | 88 | 139 | IPR017884 | SANT domain |
SMART | SM00717 | 1.9E-7 | 89 | 137 | IPR001005 | SANT/Myb domain |
Gene3D | G3DSA:1.10.10.60 | 5.7E-6 | 91 | 137 | IPR009057 | Homeodomain-like |
Pfam | PF00249 | 2.0E-6 | 92 | 134 | IPR001005 | SANT/Myb domain |
CDD | cd00167 | 0.00432 | 92 | 126 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 789 aa Download sequence Send to blast |
MVMQVPLDCE PCLAPDNLGN KDGDSSVPSS PQEHVDPKRP AKKQTRQWND SEPCLAPDNL 60 GNKDGDSSVP SSPQENTDPK RPVKKQTRQW AAWTRQEEES FFAALRQYGK NFEKITSRVQ 120 SKNKDQVRYY YYRLVRRMNK LLGPELCLDA KNSKDTNGAM LRWWSLLEKY SCKASKLHLK 180 PRRFKIFVEA LENQLLKDRK KNIKRRLSTG GMNSPVADIP ASNQVRAPGH DNRAVKMVLV 240 EKVGTGKGAL FKRHVNTGIS RTNCKVDTAS VKTTKHKRKT GLASAAACKK WEKAAIAGVS 300 LVADAAEHLE RAETDKEMEK SQEPQSGHDG SELGAPSLQV PSQNMFNDNN IHNSTKLKLQ 360 LFPIDECTQK ALEMDHRNPH LELTLSTRKK ISSVLEHLNR KWGNSKLLCE DLMLFPYWAQ 420 RENLLEYQKW TKDSTLCAAD VYYLIGSPPI FRLRYGWFSK SELESATAQP LSCTNIKEKN 480 SNINIENPSG PRNNHQAVSA EQIITLNSSS VQSGVSVSNI NNSRYRDSTA VLSSIGEASE 540 DLAPENTDMA FSAGEWADTL TNVSMGDLLS DSHNNADANC TDFSLPLSSN CLQQMPFTCD 600 SFDAAIAAHI YKHNKADSQQ ILASHAPSIW DAEVTCDAFA FQKNGAFCGE DKNACMNSSP 660 SSDKEVEELL DVDKFAYSDL NCEDIVDDCR SDHLLENPTK DFGGLTDIYW PNSLGALDLD 720 IPSSCRYNSS DLILNDNSLG GLNRLIANSL DAFQSCSFFG LDKNEPPLTA EAPPQTASIS 780 ISDFKIGS* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 199 | 206 | KKNIKRRL |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Migut.L01697.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012836030.1 | 0.0 | PREDICTED: TSL-kinase interacting protein 1 isoform X1 | ||||
Swissprot | Q8LJT8 | 0.0 | TKI1_ARATH; TSL-kinase interacting protein 1 | ||||
TrEMBL | A0A022REX5 | 0.0 | A0A022REX5_ERYGU; Uncharacterized protein (Fragment) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA8640 | 17 | 19 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G36960.2 | 0.0 | TSL-kinase interacting protein 1 |
Link Out ? help Back to Top | |
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Phytozome | Migut.L01697.1.p |