PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Migut.L01692.1.p | ||||||||
Common Name | MIMGU_mgv1a021669mg | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
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Family | TCP | ||||||||
Protein Properties | Length: 219aa MW: 23459.3 Da PI: 6.9523 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 86.7 | 5.3e-27 | 61 | 138 | 6 | 83 |
TCP 6 drhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssas 83 + ++h+k +g +RRvR++a+ aar+F+L++eLG +d+ t+eWLl+qa+p+i+++tgt+ ++++++++s+ ++ Migut.L01692.1.p 61 PSARDRHAKINGCGRRVRIPALAAARIFQLTRELGNRSDGDTVEWLLRQAEPSIIAATGTGIVPEESVSNSSRAAATT 138 56789*******************************************************999885554333333333 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF03634 | 4.3E-23 | 62 | 135 | IPR005333 | Transcription factor, TCP |
PROSITE profile | PS51369 | 20.575 | 63 | 117 | IPR017887 | Transcription factor TCP subgroup |
Sequence ? help Back to Top |
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Protein Sequence Length: 219 aa Download sequence Send to blast |
GWPTNSNNPN NSLMLVKPMH CSDMVSHSDN HHSPPPDLPH FVPPPPTSAN HNLRKSAAGG 60 PSARDRHAKI NGCGRRVRIP ALAAARIFQL TRELGNRSDG DTVEWLLRQA EPSIIAATGT 120 GIVPEESVSN SSRAAATTTT AVTYPPIAAP ISVALPPPEP NCRLDLFQPQ PQPSNPAMAL 180 DFSLNGYHQT PPFMALLLQP ATADTEVDSY RRAAEDYQ* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Migut.L01692.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012835809.1 | 1e-140 | PREDICTED: transcription factor PCF1 | ||||
TrEMBL | A0A022RI31 | 1e-158 | A0A022RI31_ERYGU; Uncharacterized protein (Fragment) | ||||
STRING | Migut.L01692.1.p | 1e-159 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA248 | 24 | 201 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G37000.1 | 5e-33 | TCP family protein |
Link Out ? help Back to Top | |
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Phytozome | Migut.L01692.1.p |