PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.L01689.2.p
Common NameMIMGU_mgv1a002281mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family MYB_related
Protein Properties Length: 660aa    MW: 73684.5 Da    PI: 6.9599
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.L01689.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding27.57.3e-09556603448
                       S-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHHT CS
   Myb_DNA-binding   4 WTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqkyl 48 
                       WT  E  +l+d+v q+G g+W++I + +     +Rt  ++k++w+++l
  Migut.L01689.2.p 556 WTIAEVRKLIDGVSQYGVGRWSRIKKLFFatsAHRTSVDLKDKWRNLL 603
                       999*******************************************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129415.815548607IPR017930Myb domain
SuperFamilySSF466895.67E-16550605IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.606.5E-13550605IPR009057Homeodomain-like
SMARTSM007172.3E-9552605IPR001005SANT/Myb domain
CDDcd116601.19E-19556604No hitNo description
PfamPF139217.2E-7556606No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 660 aa     Download sequence    Send to blast
MENGRPVLGL EDGTIDVERL LVEPQDGHVS MDSVMCFNKK IPKNTMEMVD VSCRFGASGT  60
GSAKEGEDIL NGEVLDAMPS EVDVGYLRLH DEFCSMGDEY LLGVQFAESI TNLDYGSTEA  120
LQAPFPDSQM QVSGAGSGSG STCKSDRFRK MEVLDCKNNQ FNYGCSELSD IPSYHECEML  180
IGEEPSISPR SFSLQNIGKF HNSSSYSFED ILSDENNGRQ SALGEMFCSP KTENSNEFEL  240
AVQDGETCQR QETLATTPVQ ANCTDILPTQ KRSRKPTQRY IDELADPFST NSKKRREVSS  300
STLKVKDKSL RVKDHKKCHM GTRAIRLPAE ESSVMAIQVP FASLAHNECP KDHLNSKVEC  360
VNIGNLMTNP KGKRSAPENQ KKRDESITAV YLKKDDYVTS HKKGDDYVTS RKKRDDFVTN  420
RKKGDDYVTS RKKGDDYVTS RKKGDDFVIA AANLKKRDDH AIEASQKKKN DCTGAATPAA  480
NLKKREDRAI EACQKKKNDF TDATTPKKRD KHLKHASGNK RDDCDTSALH EKKSENSLTD  540
ESPEEVSAFR KHHRLWTIAE VRKLIDGVSQ YGVGRWSRIK KLFFATSAHR TSVDLKDKWR  600
NLLKASGGIQ EQGNQQVSDI ILFIDYHILF FYNVQIDAGR EETQYGLASA AEVNIASSL*
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.L01689.2.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKR7801054e-56KR780105.1 Rehmannia glutinosa telomere repeat-binding factor like-protein (MYB29) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012836021.10.0PREDICTED: uncharacterized protein LOC105956690 isoform X1
TrEMBLA0A022RI280.0A0A022RI28_ERYGU; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G17460.11e-22TRF-like 3