 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Migut.L01404.1.p |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
|
| Family |
Trihelix |
| Protein Properties |
Length: 251aa MW: 28805.2 Da PI: 4.3442 |
| Description |
Trihelix family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Migut.L01404.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | trihelix | 51.2 | 3.3e-16 | 118 | 161 | 43 | 87 |
trihelix 43 ferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87
++s+ Ckekwen+nk++kk+ke++kkr +e+s+tcpyf+ql+a
Migut.L01404.1.p 118 HQKSARCCKEKWENINKYFKKVKESNKKR-PEDSKTCPYFHQLDA 161
4799************************8.99***********85 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 251 aa
Download sequence Send
to blast |
MELDMDTRIN IGCSAGVYMS AAKELIEKLQ NAIAEAKTEL EKYFNVSALL KHMPTQPPQP 60
VKYMIEKGNY GDEETLTVEK MFMYMEIDRI IAAMYTQHKE QVAKVHQMTN LANYLLTHQK 120
SARCCKEKWE NINKYFKKVK ESNKKRPEDS KTCPYFHQLD AIYRERGSKS DVVSFPGYGL 180
NPDDNNPMML PPPIMARPEQ FQDNESDQDD EEDDVDGDED DEDDEEDEAQ CFEIVINKQQ 240
SSVTTTNAAD *
|
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AC182562 | 1e-162 | AC182562.2 Erythranthe guttata clone MGBa-38M20, complete sequence. |
| GenBank | AC182565 | 1e-162 | AC182565.2 Erythranthe guttata clone MGBa-47F23, complete sequence. |
