PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Migut.L01307.1.p

Common Name

MIMGU_mgv1a006538mg

Organism

Mimulus guttatus

Taxonomic ID

4155

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe

Family

TCP

Protein Properties

Length: 440aa MW: 45833.3 Da PI: 7.0524

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Migut.L01307.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	125.5	5.6e-39	87	215	2	119
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg..... 88 ++k+++++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++tieWLlqqa+p+++++tgt++++a+++ + s +ss+s+ s++ Migut.L01307.1.p 87 PPKRTTTKDRHTKVDGRGRRIRMPATCAARVFQLTKELGHKSDGETIEWLLQQAEPSVIAATGTGTIPANFSsLNISARSSGSTLSAPlhlrn 179 789******************************************************************999877777777776666677777 PP TCP 89 .....kaaksaakskksqksaasalnlakesrakar 119 +++ +aa+++++ + ++ ++ ++s++ ++ Migut.L01307.1.p 180 ssyfsQSSFAAAPPQFRFRADQWDRSAVEDSSSPSS 215 777854444444777777777655555554443333 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03634	7.7E-39	91	294	IPR005333	Transcription factor, TCP
PROSITE profile	PS51369	26.583	93	147	IPR017887	Transcription factor TCP subgroup

Sequence ? help Back to Top
Protein Sequence Length: 440 aa Download sequence Send to blast
MDGGGGHGNG MQHKPNFPLQ LLEKSSTSDH HHHHHHHHQH QNQEPYISNN NNNPTAASNI 60 LAVAATTTDH HPVQQLDQPA GSKKAAPPKR TTTKDRHTKV DGRGRRIRMP ATCAARVFQL 120 TKELGHKSDG ETIEWLLQQA EPSVIAATGT GTIPANFSSL NISARSSGST LSAPLHLRNS 180 SYFSQSSFAA APPQFRFRAD QWDRSAVEDS SSPSSAQRRV LFPGIGLSSE NNSLNFLNGN 240 MNAMLQAKQE LRDTGLGMAV AAAAAAEEEE EDEEEAGGGR RKRRSSEEDL TQTQMGNYMM 300 MQSGSGNIPA SQGHGSATAF LMMTNPGGQN MSGDQSLWSF PSIGNSSMYR GSSVAAAANY 360 SGLHFMNLPA PMALLPGQQL GGGGGGGGGG GGGGLMIDGH LGMLAALNAF KYSNTHGGGG 420 GGGTEAGHGS NGGGGGDDH*

Sequence ? help Back to Top

Protein Sequence Length: 440 aa Download sequence Send to blast

MDGGGGHGNG MQHKPNFPLQ LLEKSSTSDH HHHHHHHHQH QNQEPYISNN NNNPTAASNI  60
LAVAATTTDH HPVQQLDQPA GSKKAAPPKR TTTKDRHTKV DGRGRRIRMP ATCAARVFQL  120
TKELGHKSDG ETIEWLLQQA EPSVIAATGT GTIPANFSSL NISARSSGST LSAPLHLRNS  180
SYFSQSSFAA APPQFRFRAD QWDRSAVEDS SSPSSAQRRV LFPGIGLSSE NNSLNFLNGN  240
MNAMLQAKQE LRDTGLGMAV AAAAAAEEEE EDEEEAGGGR RKRRSSEEDL TQTQMGNYMM  300
MQSGSGNIPA SQGHGSATAF LMMTNPGGQN MSGDQSLWSF PSIGNSSMYR GSSVAAAANY  360
SGLHFMNLPA PMALLPGQQL GGGGGGGGGG GGGGLMIDGH LGMLAALNAF KYSNTHGGGG  420
GGGTEAGHGS NGGGGGDDH*

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Migut.L01307.1.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_012847766.1	0.0	PREDICTED: transcription factor TCP15-like
TrEMBL	A0A022QL97	0.0	A0A022QL97_ERYGU; Uncharacterized protein
STRING	Migut.L01307.1.p	0.0	(Erythranthe guttata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA2882	23	51

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G58100.1	4e-44	TCP family protein

Link Out ? help Back to Top
Phytozome	Migut.L01307.1.p