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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Migut.L01064.1.p |
Common Name | LOC105969895, MIMGU_mgv1a006045mg |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
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Family |
CO-like |
Protein Properties |
Length: 461aa MW: 52282.9 Da PI: 4.7563 |
Description |
CO-like family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Migut.L01064.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | zf-B_box | 29.9 | 1.2e-09 | 17 | 60 | 3 | 40 |
zf-B_box 3 erkCpeHeekelqlfCedCqqllCedClleeHkg......Htvv 40
r C+++ +k+++++C ++ +lC++C ++ H+ H++v
Migut.L01064.1.p 17 VRACDNCVRKRARWYCAADDAFLCQSCDSSVHSAnplarrHERV 60
578*****************************667888888876 PP
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2 | CCT | 66.2 | 9.4e-23 | 405 | 448 | 1 | 44 |
CCT 1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqa 44
R+a+++RY+eKr+tR+F+KkirYe+RK +Ae+RpR+KGrFvk+a
Migut.L01064.1.p 405 RQARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKRA 448
99****************************************86 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 461 aa
Download sequence Send
to blast |
MISSDRNMAS AVGGKSVRAC DNCVRKRARW YCAADDAFLC QSCDSSVHSA NPLARRHERV 60 RLKTTSFKSS LDGSSDQLPQ IQIPPPTWHQ GFTRKARTPR QKKNNSNKQR SSFGHLVPEI 120 CSEADNSNEE EEEEENEEQL LYRVPIFDPF VAELCTPFNN NNNNNNNNNN NIHNGTETCE 180 SKGELVISDG GFGEEMNHLQ GFLPSEMDLA EFAADVESLL GKGLEDESFD MEGLGLLDCD 240 DEREKLKWAN LVSERVKVED DDEECNNGEF IDIGRETFEL NFDYNSPITG EDEEEEEEDN 300 KIENVEPIAM NNFEDSNSKM FDSKKIFLRL DYDGVLSSWD ERKSPWTTGE RPDLDSDECW 360 PDCSGTCGKM HVYGNHHHDM GMMMMMMGGG GTHSGAVVAS VDGGRQARVS RYREKRRTRL 420 FSKKIRYEVR KLNAEKRPRM KGRFVKRANF VAQAFALLNK *
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Nucleic Localization
Signal ? help
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 |
No. |
Start |
End |
Sequence |
1 | 415 | 431 | RRTRLFSKKIRYEVRKL |
Best hit in Arabidopsis thaliana ? help
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Hit ID |
E-value |
Description |
AT1G25440.1 | 4e-96 | B-box type zinc finger protein with CCT domain |