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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Migut.L00296.1.p |
Common Name | LOC105967834, MIMGU_mgv1a003577mg |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
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Family |
GRAS |
Protein Properties |
Length: 577aa MW: 62867.6 Da PI: 6.0645 |
Description |
GRAS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Migut.L00296.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GRAS | 298.2 | 2.1e-91 | 210 | 575 | 2 | 374 |
GRAS 2 velLlecAeavssgdlelaqalLarlsel.aspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkf 93
v+ L++ Ae++++++l+l q +Larl+++ +sp+g+p+qR+a+yf+eAL++ l++ + + ++s+++ +++++a+k+fs vsP++ f
Migut.L00296.1.p 210 VDELIRLAECFETNSLQLGQVILARLNQRlRSPAGKPIQRAAFYFKEALQSLLTG-----STRPSHHAASSSEIIQTIKAQKTFSSVSPVPMF 297
678*************************99*************************.....333344445555699****************** PP
GRAS 94 shltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRp......egppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnv 180
+ +taNqa+lea++g+ vH+iDfdi+ G++W++++++La+++ ++pp lRi +++++e + e + ++e+L+ fA+ l+++fe ++
Migut.L00296.1.p 298 AGFTANQAVLEAMDGSMSVHVIDFDIGIGGHWASFMKELADKAaesrraAPPPALRISALVPEE--YAAESRLIRENLTAFARDLNIRFEVEF 388
****************************************9886666667799*********66..99999********************** PP
GRAS 181 lvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadh...nsesFlerflealeyysalfds 270
+ +++++ l++++ ++ gE++aV l+ +++r + +e+L+ ++++sP+vvv+v+ e ++ +++s+ + +++ le+ys+l++s
Migut.L00296.1.p 389 VPVRTFQYLSFKAVKFADGEKVAVLLSPAIFRHV---------GTEFLNDLRRISPHVVVHVDVEGQMgfgTAPSYRQAVIDGLEFYSTLLES 472
*9******************************98.........468*******************7764455679****************** PP
GRAS 271 l.eaklpres.....eerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgs 357
l +a++ + e+++ +E ++l ++iv+ v ++g++ Wre+l +aG+++v+ls++++ qa++llr+v+++g++v +++++
Migut.L00296.1.p 473 LeAANFNNGGaggggEWMRRIETFVLYPKIVEGVEAAGRR-------GTPWREALVAAGLRQVALSQFTEFQAECLLRRVQVRGFHVYKRQAE 558
*555544433556669**********************98.......789******************************************* PP
GRAS 358 lvlgWkdrpLvsvSaWr 374
++l+W++rpLv++SaWr
Migut.L00296.1.p 559 MLLCWHERPLVATSAWR 575
****************8 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0030154 | Biological Process | cell differentiation |
GO:0048831 | Biological Process | regulation of shoot system development |
Sequence ? help Back to Top |
Protein Sequence Length: 577 aa
Download sequence Send
to blast |
MKVPFPAANN HNTSKPAPSS NSATTNAAAP APPSAAAAAH SSSSSSPNYE PKSVLELRGS 60 PSPVSGKPNS DFLIGGGGGG GGDRLIELED HVLNNIEHPQ LEDWDSLMRD LGLHDDFNPV 120 SKPFSSSSQS DLTHQITHNI NNNNNNNNIH YSELAEFPPV TSFESTQFAA ADFGLLPDIP 180 IYSSAAPPTS FEGLSGDANN NNWNVGFDYV DELIRLAECF ETNSLQLGQV ILARLNQRLR 240 SPAGKPIQRA AFYFKEALQS LLTGSTRPSH HAASSSEIIQ TIKAQKTFSS VSPVPMFAGF 300 TANQAVLEAM DGSMSVHVID FDIGIGGHWA SFMKELADKA AESRRAAPPP ALRISALVPE 360 EYAAESRLIR ENLTAFARDL NIRFEVEFVP VRTFQYLSFK AVKFADGEKV AVLLSPAIFR 420 HVGTEFLNDL RRISPHVVVH VDVEGQMGFG TAPSYRQAVI DGLEFYSTLL ESLEAANFNN 480 GGAGGGGEWM RRIETFVLYP KIVEGVEAAG RRGTPWREAL VAAGLRQVAL SQFTEFQAEC 540 LLRRVQVRGF HVYKRQAEML LCWHERPLVA TSAWRY*
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