PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.L00031.1.p
Common NameLOC105973118, MIMGU_mgv1a023608mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family SRS
Protein Properties Length: 376aa    MW: 39961.7 Da    PI: 8.1275
Description SRS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.L00031.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF702215.51.2e-661272873153
            DUF702   3 sgtasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasaaeaaskrkrel............kskkq 83 
                        g++sCqdCGnqakkdC+h+RCRtCCksrgf+CathvkstWvpaakrrerq+qla++++++++s+ +++ kr+r+             +++++
  Migut.L00031.1.p 127 GGGISCQDCGNQAKKDCTHMRCRTCCKSRGFQCATHVKSTWVPAAKRRERQNQLASLQQQQNQST-TSTGKRHRSRtddvnhnliinnNNSAS 218
                       5789****************************************************998887766.333333333334667778765444555 PP

            DUF702  84 salsstklssaeskkeletsslPeevsseavfrcvrvs.svddgeeelaYqtavsigGhvfkGiLydqGle 153
                       ++l +t++++++  + le+ ++P+evsseavfrcvrvs +v+d+ee+ aYqtav+i GhvfkGiLydqG+e
  Migut.L00031.1.p 219 NSLVCTRIPTTT--SGLEVGKFPTEVSSEAVFRCVRVSaAVEDAEEQWAYQTAVNICGHVFKGILYDQGTE 287
                       566677777665..5588999****************84599***************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF051421.7E-62129287IPR007818Protein of unknown function DUF702
TIGRFAMsTIGR016233.8E-27131173IPR006510Zinc finger, lateral root primordium type 1
TIGRFAMsTIGR016247.1E-25237285IPR006511Lateral Root Primordium type 1, C-terminal
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0010051Biological Processxylem and phloem pattern formation
GO:0010252Biological Processauxin homeostasis
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0048479Biological Processstyle development
GO:0048480Biological Processstigma development
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0046982Molecular Functionprotein heterodimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 376 aa     Download sequence    Send to blast
MAGFFSLGGG GGRGTTTGGS SRNPNQESSN PPSEINPESW FLYRNEEISY KGFELWQPQP  60
QHHHQQAENF LHRGVGVNPL QDLYASAGGL AVGPSRGGGF NMSSVDEQSP RSGFLMMRSG  120
GGGGGGGGGI SCQDCGNQAK KDCTHMRCRT CCKSRGFQCA THVKSTWVPA AKRRERQNQL  180
ASLQQQQNQS TTSTGKRHRS RTDDVNHNLI INNNNSASNS LVCTRIPTTT SGLEVGKFPT  240
EVSSEAVFRC VRVSAAVEDA EEQWAYQTAV NICGHVFKGI LYDQGTEGQY MPAETSSGGG  300
GSVSAGATHH HQQQQQQQQQ LNLITGNSSN TAAANTSSGG AGATAFMDTS HHLYTGSINS  360
FLSGTQFFPP PPPRS*
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator involved in the transcriptional regulation of terpene biosynthesis in glandular trichomes (PubMed:24884371, PubMed:24142382). Binds to the promoter of the linalool synthase TPS5 and promotes TPS5 gene transactivation (PubMed:24884371, PubMed:24142382). Acts synergistically with MYC1 in the transactivation of TPS5 (PubMed:24884371). {ECO:0000269|PubMed:24142382, ECO:0000269|PubMed:24884371}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00613PBMTransfer from AT3G51060Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.L00031.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012853590.10.0PREDICTED: protein SHI RELATED SEQUENCE 1
RefseqXP_012853591.10.0PREDICTED: protein SHI RELATED SEQUENCE 1
SwissprotK4B6C92e-93EOT1_SOLLC; Protein EXPRESSION OF TERPENOIDS 1
TrEMBLA0A022Q8000.0A0A022Q800_ERYGU; Uncharacterized protein
STRINGMigut.L00031.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA67824110
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G51060.17e-61Lateral root primordium (LRP) protein-related
Publications ? help Back to Top
  1. Tomato Genome Consortium
    The tomato genome sequence provides insights into fleshy fruit evolution.
    Nature, 2012. 485(7400): p. 635-41
    [PMID:22660326]
  2. Spyropoulou EA,Haring MA,Schuurink RC
    RNA sequencing on Solanum lycopersicum trichomes identifies transcription factors that activate terpene synthase promoters.
    BMC Genomics, 2014. 15: p. 402
    [PMID:24884371]