PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.K01307.2.p
Common NameLOC105960949, MIMGU_mgv1a009252mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family MYB_related
Protein Properties Length: 307aa    MW: 34010.6 Da    PI: 5.2274
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.K01307.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding52.79.8e-173176148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                      rg++T +E+  +++++++lG++ W++Ia +++ +Rt++++k++w+++l
  Migut.K01307.2.p 31 RGKFTSQEEHTIIQLHALLGNR-WSAIATHLQ-KRTDNEIKNYWNTHL 76
                      89********************.*********.************996 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.603.8E-111238IPR009057Homeodomain-like
PROSITE profilePS500904.171225IPR017877Myb-like domain
SuperFamilySSF466891.8E-201284IPR009057Homeodomain-like
PROSITE profilePS5129425.6112680IPR017930Myb domain
SMARTSM007171.6E-143078IPR001005SANT/Myb domain
PfamPF002496.3E-163176IPR001005SANT/Myb domain
CDDcd001673.32E-103376No hitNo description
Gene3DG3DSA:1.10.10.601.4E-213977IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 307 aa     Download sequence    Send to blast
MEAGEPCLSM PRCGKSCRLR WTNYLRPDIK RGKFTSQEEH TIIQLHALLG NRWSAIATHL  60
QKRTDNEIKN YWNTHLKKRL ANMGIDPVTH KPKNGTLLSG HSKNSANLSH MAQWENARLE  120
AEARLVKQSK LRSPALDSFQ AQDSEFPSGP SPVHKPVGPS PYPDVLKGWI GGAWEKTSSS  180
FLEHVGEGIL TDELEREKDS GNYLAALRDE GIDNPVQFTP ELHEPPLFST EWASESMLGH  240
TSEHVPSDNF AETFTDLLLN NSCDEGDGGE SDNSNGSDGD SCEGNRNYWD SILNLVNSSP  300
SDSPIF*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1a5j_A1e-16128040108B-MYB
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtInvolved in the control of epidermal cell morphogenesis in petals. Promotes unidirectional cell expansion once outgrowth has been initiated (PubMed:17376813). Coordinately with WIN1/SHN1, participates in the regulation of cuticle biosynthesis and wax accumulation in reproductive organs and trichomes. Functions in cuticle nanoridge formation in petals and stamens, and in morphogenesis of petal conical cells and trichomes (PubMed:23709630). Functions as a major regulator of cuticle formation in vegetative organs by regulating the cuticle biosynthesis genes CYP86A8/LCR and CER1 (PubMed:24169067). {ECO:0000269|PubMed:17376813, ECO:0000269|PubMed:23709630, ECO:0000269|PubMed:24169067}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.K01307.2.p
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHQ2041970.0HQ204197.1 Mimulus guttatus pop-variant IM767 MYB transcription factor MIXTA-like 7 protein (MYBML7) mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012840623.10.0PREDICTED: transcription factor MYB28 isoform X2
SwissprotQ9LXF11e-74MYB16_ARATH; Transcription factor MYB16
TrEMBLA0A022R4U70.0A0A022R4U7_ERYGU; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G15310.14e-70myb domain protein 16
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]
  2. Scoville AG,Barnett LL,Bodbyl-Roels S,Kelly JK,Hileman LC
    Differential regulation of a MYB transcription factor is correlated with transgenerational epigenetic inheritance of trichome density in Mimulus guttatus.
    New Phytol., 2011. 191(1): p. 251-63
    [PMID:21352232]
  3. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  4. Huang BH, et al.
    Positive selection and functional divergence of R2R3-MYB paralogous genes expressed in inflorescence buds of Scutellaria species (Labiatae).
    Int J Mol Sci, 2015. 16(3): p. 5900-21
    [PMID:25782156]
  5. Cui F, et al.
    Dissecting Abscisic Acid Signaling Pathways Involved in Cuticle Formation.
    Mol Plant, 2016. 9(6): p. 926-38
    [PMID:27060495]