PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.K01270.1.p
Common NameLOC105960853, MIMGU_mgv1a012180mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family TCP
Protein Properties Length: 260aa    MW: 29476.4 Da    PI: 6.1336
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.K01270.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP99.46.5e-31421722104
               TCP   2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt............................. 65 
                        g+kdrhsk++T +g+RdRRvRls+++a++++dLq++LG+ ++sk ++WLl++ak+ i+ l+ +                             
  Migut.K01270.1.p  42 FGGKDRHSKVCTVKGLRDRRVRLSVPTAIQLYDLQERLGLNQPSKVVDWLLEAAKADIDLLPPLqqipimqniqnydpvmkfndvvvsssger 134
                       689*************************************************************77777766665555544444444322221 PP

               TCP  66 ssssaseceaesssssasnsssg......................kaaksaakskksqksa 104
                       +     e+              g                      +++    +s+  q+++
  Migut.K01270.1.p 135 N-----ET--------------GsnwsrnddeeeeitrqynnflsRSS----SSSVVQNNP 172
                       0.....22..............12222222222223333333332111....122222222 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5136930.07544102IPR017887Transcription factor TCP subgroup
PfamPF036341.0E-2844171IPR005333Transcription factor, TCP
Sequence ? help Back to Top
Protein Sequence    Length: 260 aa     Download sequence    Send to blast
MIPMDLDFTA KQETDKPSSS STTTTSWSRL KDPRIVRVSR AFGGKDRHSK VCTVKGLRDR  60
RVRLSVPTAI QLYDLQERLG LNQPSKVVDW LLEAAKADID LLPPLQQIPI MQNIQNYDPV  120
MKFNDVVVSS SGERNETGSN WSRNDDEEEE ITRQYNNFLS RSSSSSVVQN NPASFSSLMN  180
NHINNNNNNN SFLRWEYPSN LTLSQPPVSL GLASSSSQYN GDQDLQNFGH FFQFQPYYFP  240
PPQNNNSASE HDRQNEPRS*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5zkt_A2e-1749103155Putative transcription factor PCF6
5zkt_B2e-1749103155Putative transcription factor PCF6
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.K01270.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012840515.10.0PREDICTED: transcription factor TCP24-like
TrEMBLA0A022R3060.0A0A022R306_ERYGU; Uncharacterized protein
STRINGMigut.K01270.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA8212499
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G08070.14e-43TCP domain protein 17