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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Migut.K00961.1.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
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Family |
MIKC_MADS |
Protein Properties |
Length: 183aa MW: 20552.4 Da PI: 8.4685 |
Description |
MIKC_MADS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Migut.K00961.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | SRF-TF | 72.4 | 3.8e-23 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
krie++ r v fskRrng++KKA+ELSvLCd++ a iifs++gkl+ y+s
Migut.K00961.1.p 9 KRIEENGARMVCFSKRRNGLIKKAKELSVLCDVDLAAIIFSNRGKLFQYCS 59
79***********************************************96 PP
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2 | K-box | 29.6 | 2.8e-11 | 100 | 155 | 41 | 96 |
K-box 41 edLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrk 96
+L++Ls+ +L Le+q+ +l + Rs K++ +l+ ++ l++ +k+l ee+++L++
Migut.K00961.1.p 100 SELDELSVTDLVLLEKQIGVALIQTRSAKTQRMLNTVSSLREEKKNLAEEKRSLEE 155
68**************************************************9975 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
Protein Sequence Length: 183 aa
Download sequence Send
to blast |
MGRKKLEIKR IEENGARMVC FSKRRNGLIK KAKELSVLCD VDLAAIIFSN RGKLFQYCST 60 DSILQRYQAE SSTGSREEKG QSSDDSGFIT SEEILQKVES ELDELSVTDL VLLEKQIGVA 120 LIQTRSAKTQ RMLNTVSSLR EEKKNLAEEK RSLEEITGSN RNASKKKMIV DLNNVADDRM 180 TE*
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Functional Description ? help
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Source |
Description |
UniProt | Probable MADS-box transcription factor that functions with J2 and EJ2 in meristem maturation. {ECO:0000269|PubMed:28528644}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | KP172243 | 3e-88 | KP172243.1 Erythranthe guttata MADS affecting flowering 601 (MAF601) mRNA, partial cds. |