PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.K00951.1.p
Common NameLOC105962382, MIMGU_mgv1a005903mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family SBP
Protein Properties Length: 466aa    MW: 50947.4 Da    PI: 7.9793
Description SBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.K00951.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SBP126.21.3e-39183260178
                       --SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS
               SBP   1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 
                       +C v+gC+adls+ak+yhr+h+vC+ hsk+++v+v gle+rfCqqCsrfh+lsefDe+krsCrrrL++hn+rrrk+q+
  Migut.K00951.1.p 183 RCAVDGCNADLSTAKDYHRKHRVCDGHSKCAKVIVGGLERRFCQQCSRFHNLSEFDERKRSCRRRLSDHNARRRKPQQ 260
                       6**************************************************************************997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:4.10.1100.107.2E-33180245IPR004333Transcription factor, SBP-box
PROSITE profilePS5114132.171181258IPR004333Transcription factor, SBP-box
SuperFamilySSF1036123.27E-37182263IPR004333Transcription factor, SBP-box
PfamPF031109.4E-30184257IPR004333Transcription factor, SBP-box
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 466 aa     Download sequence    Send to blast
MDWNAKWDWE NIVAFGSKAS ESPKKLQLVD WMIVDDGEID AGSFNPSMCG GGNNSGGAAS  60
GSDGGHVSST KSSISASTDS STKDVMQSSN FRLMNFEGFP ENFSNKIEMK ETEVSGTYPV  120
LEASVGSVEP LIGLKLGKRT YFENSGAGGN VKSVSSSSSV VPNTSTSLLK KTKSPGQNLP  180
APRCAVDGCN ADLSTAKDYH RKHRVCDGHS KCAKVIVGGL ERRFCQQCSR FHNLSEFDER  240
KRSCRRRLSD HNARRRKPQQ ETIQFNSTRL SSSFYGTGGR QQTGFLLNNG PLIQSGNAAN  300
TTWGNTCNSK FTLTKGYPFI SNGNGVSEEQ MHMPGIKLPH ATNMHGSKGS HISSHLDAAM  360
EYRRALSLLS TNSWSSCGQE SMPLHNHNNN NNNNNPMMHE NETFVTQPMM HTIPEGIPLS  420
AGSEFWLSTA GHQSTHHHRT NSNNYDEIQL SVTPYEPDFY SNILN*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ul4_A7e-291842571184squamosa promoter binding protein-like 4
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1239256RKRSCRRRLSDHNARRRK
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.K00951.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012842135.10.0PREDICTED: squamosa promoter-binding-like protein 3
RefseqXP_012842137.10.0PREDICTED: squamosa promoter-binding-like protein 3
RefseqXP_012842138.10.0PREDICTED: squamosa promoter-binding-like protein 3
TrEMBLA0A022R3T10.0A0A022R3T1_ERYGU; Uncharacterized protein
STRINGMigut.K00951.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA41292444
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G43270.35e-58squamosa promoter binding protein-like 2