PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Migut.K00897.1.p

Common Name

LOC105959445, MIMGU_mgv1a027035mg

Organism

Mimulus guttatus

Taxonomic ID

4155

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe

Family

GeBP

Protein Properties

Length: 325aa MW: 35283.3 Da PI: 4.742

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Migut.K00897.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	75.3	1.1e-23	37	131	2	97
DUF573 2 lfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskk 94 +f+r+w+e Dei +LqGl+d+ +++ d+ fy +++ + ++ksql+eK+rrL+kKf+ +++ +g + s + hd+ ++ls++ Migut.K00897.1.p 37 KFHRIWTEPDEIRFLQGLLDCSSQNV-AFPRDLGIFYARFSSTMPQPYTKSQLSEKLRRLRKKFRVISTRLCKGMDRSQLSLHDRALYGLSEQ 128 699****************77665.6678********************************************************** PP DUF573 95 iWg 97 +W+ Migut.K00897.1.p 129 LWH 131 7 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF04504	1.3E-25	38	131	IPR007592	Protein of unknown function DUF573

Sequence ? help Back to Top
Protein Sequence Length: 325 aa Download sequence Send to blast
MDSTTLIQPH PTSKLPIKRK TPDPNPPPLD GGAPPFKFHR IWTEPDEIRF LQGLLDCSSQ 60 NVAFPRDLGI FYARFSSTMP QPYTKSQLSE KLRRLRKKFR VISTRLCKGM DRSQLSLHDR 120 ALYGLSEQLW HPDYAATSPF SGARNVGGGG GRSGGGGGDG EMKRSELVGI KVDFSPNLPV 180 VISGSDQEND VDLDLDLDLE LDGESEEVQL SEVNVEFEGE EEEAVDDDSV EGIGGGGAAV 240 NSDSGGENRI GEAAAKVVVN VFDECFKDVR KRFLLSDQGG ETGGGGGGGS ADTFQVRWQK 300 QRIAELDVLG SRLRLVIEHS LQKH*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	149	157	GGRSGGGGG

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Migut.K00897.1.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_012839005.1	0.0	PREDICTED: uncharacterized protein LOC105959445
TrEMBL	A0A022RZ51	0.0	A0A022RZ51_ERYGU; Uncharacterized protein
STRING	Migut.K00897.1.p	0.0	(Erythranthe guttata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA12822	19	21

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G28040.1	3e-16	DNA-binding storekeeper protein-related transcriptional regulator

Link Out ? help Back to Top
Phytozome	Migut.K00897.1.p
Entrez Gene	105959445