PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Migut.K00459.1.p | ||||||||
Common Name | MIMGU_mgv1a0100951mg | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
|
||||||||
Family | Trihelix | ||||||||
Protein Properties | Length: 320aa MW: 36537.6 Da PI: 4.1975 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 34.7 | 4.7e-11 | 75 | 158 | 2 | 87 |
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkm.rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 W+++e +L+ea e+ +l+r++l++ +W + ++k+ + g er+ C++ ++ l+++ykk+++ + + + s++++f++++a Migut.K00459.1.p 75 WSEEESFVLLEAWGERYMELGRRSLRGEDWVDLAEKIaEMSGAERTELGCRNQLDALKNKYKKERAKVEIG---HGSKWVFFKKMDA 158 *************************************455799*********************9987765...5779*******85 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF13837 | 1.4E-18 | 73 | 159 | No hit | No description |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 320 aa Download sequence Send to blast |
MKNPNSYAYG TSNAIQYQEE DEDSDSDENE ETPDQNFNQN GNFHNYDDSK RHPKKRKLES 60 FVSNYDAAPP RREIWSEEES FVLLEAWGER YMELGRRSLR GEDWVDLAEK IAEMSGAERT 120 ELGCRNQLDA LKNKYKKERA KVEIGHGSKW VFFKKMDALL NTRNRGHCGL GCGVDSGEYV 180 FMNPHVYLER SNVLDEMRDS PGQSDEDDDV DDGDADDLDG GGGEEEGGGE CARLLADSIH 240 KFGEIYEKIE ESKRKQMVEL ENMRQDFQRE LELQKKQIVE RANAEIAKLR EMDDDEDDGD 300 EDGDDDNTDT SRLAVLEAS* |
Cis-element ? help Back to Top | |
---|---|
Source | Link |
PlantRegMap | Migut.K00459.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | ||||
Refseq | XP_012854473.1 | 0.0 | PREDICTED: trihelix transcription factor ASIL1 | ||||
TrEMBL | A0A022Q720 | 0.0 | A0A022Q720_ERYGU; Uncharacterized protein (Fragment) | ||||
STRING | Migut.K00459.1.p | 0.0 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
---|---|---|---|
Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA12060 | 20 | 22 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G24490.1 | 8e-73 | Trihelix family protein |
Link Out ? help Back to Top | |
---|---|
Phytozome | Migut.K00459.1.p |