PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Migut.K00328.1.p | ||||||||
Common Name | LOC105961432, MIMGU_mgv1a004242mg | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
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Family | WRKY | ||||||||
Protein Properties | Length: 539aa MW: 59009.6 Da PI: 6.4148 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 80.3 | 2e-25 | 183 | 239 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +DgynWrKYGqK+vk+ e +rsYYrCt+++C++kk +e+s++ ++++e++Y+++Hnh+ Migut.K00328.1.p 183 SDGYNWRKYGQKQVKSPEGSRSYYRCTFSDCCAKK-IECSDRSNRLIETVYRSHHNHD 239 7********************************98.*********************7 PP | |||||||
2 | WRKY | 96.6 | 1.7e-30 | 383 | 439 | 3 | 59 |
-SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 Dgy+WrKYGqK+vkg+++pr+YYrCtsagCpv+k++e + ++ ++v+itY+g H+he Migut.K00328.1.p 383 DGYRWRKYGQKMVKGNPHPRNYYRCTSAGCPVRKHIESAVDNANAVVITYKGMHDHE 439 9*******************************************************8 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 1.0E-21 | 175 | 241 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 5.75E-20 | 179 | 241 | IPR003657 | WRKY domain |
SMART | SM00774 | 2.5E-24 | 182 | 240 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 18.969 | 183 | 241 | IPR003657 | WRKY domain |
Pfam | PF03106 | 1.4E-17 | 184 | 239 | IPR003657 | WRKY domain |
Gene3D | G3DSA:2.20.25.80 | 3.9E-31 | 366 | 441 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 9.42E-27 | 374 | 441 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 31.479 | 376 | 441 | IPR003657 | WRKY domain |
SMART | SM00774 | 2.9E-34 | 381 | 440 | IPR003657 | WRKY domain |
Pfam | PF03106 | 2.8E-23 | 383 | 438 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 539 aa Download sequence Send to blast |
MEEERNRSSV ALPVTEIENS TPLNGGEGEI RDQIIIIEKI DEQRPVLNYA AGNNSGGESK 60 APEFETLDSV QLPEGDLQAD FDESSHLLSE VPVEYSLQPL KPTEEIEDQV TAMHDESLKC 120 ITGRSAELVV QHQMQAEAPN SIVPTSKLQP ENGNNLCLTE NNMQNSPDPK PLAAAMPTQK 180 NPSDGYNWRK YGQKQVKSPE GSRSYYRCTF SDCCAKKIEC SDRSNRLIET VYRSHHNHDP 240 PQKMNCTREN RPSLAIVPST PSKESLPSTP LKESLPSTPL KESLPSIPLK ESLPPTPSKE 300 SLPPIPSKEA LSGAHDVPEI KQQESSDSDQ TTETNAKEEY ADGSESRKRQ KSNSADVLES 360 LPKPGKKSKY VVHAAVDVGI SGDGYRWRKY GQKMVKGNPH PRNYYRCTSA GCPVRKHIES 420 AVDNANAVVI TYKGMHDHET PVPRKRHSPK SATTHSPRSA THWPKSATAN AASANAASSP 480 PVPLDDLQNK TNPHTTSRTQ WSVSKEGELT GEAMNVAGEK ESGSARTLLS VGFEIKPC* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
2ayd_A | 6e-24 | 368 | 441 | 1 | 74 | WRKY transcription factor 1 |
Search in ModeBase |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Migut.K00328.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012841117.1 | 0.0 | PREDICTED: probable WRKY transcription factor 32 | ||||
TrEMBL | A0A022R307 | 0.0 | A0A022R307_ERYGU; Uncharacterized protein | ||||
STRING | Migut.K00328.1.p | 0.0 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA9189 | 21 | 27 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G30935.1 | 7e-94 | WRKY DNA-binding protein 32 |
Link Out ? help Back to Top | |
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Phytozome | Migut.K00328.1.p |
Entrez Gene | 105961432 |