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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Migut.K00262.1.p |
Common Name | MIMGU_mgv1a020062mg |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
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Family |
CO-like |
Protein Properties |
Length: 373aa MW: 41066.9 Da PI: 7.6685 |
Description |
CO-like family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Migut.K00262.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | zf-B_box | 19 | 2.8e-06 | 22 | 54 | 4 | 36 |
zf-B_box 4 rkCpeHeekelqlfCedCqqllCedClleeHkg 36
+ C+ +++ + lfC+ + ++C +C + H+
Migut.K00262.1.p 22 KPCDYCNSTAALLFCRAESAFMCMSCDAKLHSA 54
68******99******************99965 PP
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2 | zf-B_box | 24 | 8.1e-08 | 67 | 108 | 3 | 38 |
zf-B_box 3 erkCpeHeekelqlfCedCqqllCedClleeHkg......Ht 38
++C+ +++ ++ C+ + lC +C +H+ H+
Migut.K00262.1.p 67 VWMCDVCQQAPAAVTCKADAAALCVTCDRDIHSAnplarrHE 108
689*****************************6566766776 PP
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3 | CCT | 68.1 | 2.3e-23 | 299 | 342 | 1 | 44 |
CCT 1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqa 44
R+a++lRYkeKrk+RkFeK+irY+sRKa+Ae+RpR+KGrF+k++
Migut.K00262.1.p 299 RKARVLRYKEKRKNRKFEKTIRYASRKAYAETRPRIKGRFAKRT 342
9*****************************************97 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 373 aa
Download sequence Send
to blast |
MTQLDGGGGK YFPAGWNVAA AKPCDYCNST AALLFCRAES AFMCMSCDAK LHSADDKPAA 60 ARRHERVWMC DVCQQAPAAV TCKADAAALC VTCDRDIHSA NPLARRHERA AVVPFYDTAE 120 SMVPMKSSTP SSTAAALSGG DSHRKLDNST ILNDYFPDSW ISSEPFVTTK LPADNPAMDF 180 FFSDSDQLLN FDNYQIFSSN PFNDSVVPVQ TTVKPPVQAQ LIHKQPPENR FEIDFTRSNI 240 TSYTNQKFQA TSSSTDVGIV PDVSSGGVSE TTSYPFATTS VKSENYDPIP IRSINHVDRK 300 ARVLRYKEKR KNRKFEKTIR YASRKAYAET RPRIKGRFAK RTEYDSDADE IFSSGAGSNF 360 FADAGYGVVP SF*
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