PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Protein Features |

Gene Ontology |

Cis-element |

Regulation |

Orthologous Group |

Basic Information? help Back to Top

TF ID

Migut.K00205.1.p

Organism

Mimulus guttatus

Taxonomic ID

4155

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe

Family

WOX

Protein Properties

Length: 237aa MW: 25032.8 Da PI: 7.1768

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Migut.K00205.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	24.6	4.4e-08	9	40	30	57
HHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 30 reeLAkkl....gLterqVkvWFqNrRakekk 57 ++ k l ++ +++V++WFqNrR + ++ Migut.K00205.1.p 9 TVKIRKLLekfgSVGDANVFYWFQNRRSRSRR 40 5555555555578999*************997 PP
2	Wus_type_Homeobox	61.8	1.5e-20	1	42	24	65
Wus_type_Homeobox 24 lrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 +++P+k+e+ +i++ Le++G ++d+NVfyWFQNr++R+r++q Migut.K00205.1.p 1 MVNPPKDETVKIRKLLEKFGSVGDANVFYWFQNRRSRSRRRQ 42 78**************************************97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50071	8.892	1	41	IPR001356	Homeobox domain
SuperFamily	SSF46689	1.31E-7	4	47	IPR009057	Homeodomain-like
Pfam	PF00046	1.4E-5	8	40	IPR001356	Homeobox domain
Gene3D	G3DSA:1.10.10.60	7.7E-5	15	45	IPR009057	Homeodomain-like

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0005634	Cellular Component	nucleus
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 237 aa Download sequence Send to blast
MVNPPKDETV KIRKLLEKFG SVGDANVFYW FQNRRSRSRR RQRQMQAGLC GGGGGEHQQQ 60 AQPRGGGSNG GYSGGGGIHY ENLLSGGGGG LVAPNNHPVI SYTSSNCVVG SSSSSSSCGF 120 DGNIINGKNN SSDDLFLFSG HPGSVQDYDP NPGFCFAGGA STLNYQPEVI TVFINGVATE 180 IGRGAVDMKA VFGGDFVLFH SSGVPVQVNE YGFLLQSLQH GESYFLVIIS LFHLIN*

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Migut.K00205.1.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_012857238.1	1e-171	PREDICTED: WUSCHEL-related homeobox 11-like isoform X1
TrEMBL	A0A022PWX3	1e-117	A0A022PWX3_ERYGU; Uncharacterized protein (Fragment)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA6166	22	31

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G03660.1	2e-25	WUSCHEL related homeobox 11

Link Out ? help Back to Top
Phytozome	Migut.K00205.1.p