PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.J01801.1.p
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family bHLH
Protein Properties Length: 353aa    MW: 38319.8 Da    PI: 9.1447
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.J01801.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH40.26.1e-13280325655
                       HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                       +++Er RR ri +++ +L+el+P+     +k  + a++L +Av+YIksLq
  Migut.J01801.1.p 280 SIAERVRRTRISERMRKLQELVPNM----DKQTNTADMLDLAVDYIKSLQ 325
                       689*********************7....688*****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.326274324IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.24E-15277333IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000833.56E-12278327No hitNo description
Gene3DG3DSA:4.10.280.103.2E-14279337IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000107.2E-10280325IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003539.4E-13280330IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0048573Biological Processphotoperiodism, flowering
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 353 aa     Download sequence    Send to blast
MPNNIFATIN PNPRGEHHHF PLMESQNNSG LLRFRSAPTS FLADLAEKSA HVMDINIDDN  60
NSCNKGVSGN YTRFPAAMNS QLPPQYPRHQ SGGGGGGGEL GSLSVGGGGG GGGFGLVRQN  120
SSPAGLLSQN GYAGVRNHTN FPSVTPSSSP LGLLSRIKEV ENEHGGPHSP HYTKVGNSGG  180
DNLFSTTSGF PFASWNDSSY FAETNFTSGI KTEVDNDPKP IFITENEELI RNRPYSLSHH  240
LSLPKTNSSE IANMEKLLML QDSVPCKIRA KRGCATHPRS IAERVRRTRI SERMRKLQEL  300
VPNMDKQTNT ADMLDLAVDY IKSLQKQYKI LGDSRANCKC SASQKVILNQ TH*
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00308DAPTransfer from AT2G42280Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.J01801.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012834332.10.0PREDICTED: transcription factor bHLH130-like
TrEMBLA0A022RHL80.0A0A022RHL8_ERYGU; Uncharacterized protein
STRINGMigut.J01801.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA51942437
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42280.16e-73bHLH family protein