PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Migut.J01340.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
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Family | WRKY | ||||||||
Protein Properties | Length: 477aa MW: 52966.1 Da PI: 6.0404 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 75.3 | 7.3e-24 | 181 | 235 | 3 | 58 |
-SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS CS WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnh 58 DgynWrKYGqK+vk+ e +rsY+rCt+ gC++kk +e++++ ++vvei+Y+ +Hnh Migut.J01340.1.p 181 DGYNWRKYGQKQVKSPEGSRSYFRCTFYGCTAKK-IECCDRSNRVVEIVYRIHHNH 235 9*******************************98.********************* PP | |||||||
2 | WRKY | 95.5 | 3.6e-30 | 348 | 405 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +Dgy+WrKYGqK+vkgs++pr+YYrCts+gCpv+k+ ers ++ ++v+i Y+g H+h+ Migut.J01340.1.p 348 SDGYRWRKYGQKMVKGSPHPRNYYRCTSSGCPVRKQTERSMDNASAVVISYKGVHDHD 405 7********************************************************7 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF118290 | 2.62E-19 | 177 | 238 | IPR003657 | WRKY domain |
SMART | SM00774 | 1.0E-22 | 179 | 237 | IPR003657 | WRKY domain |
Gene3D | G3DSA:2.20.25.80 | 2.6E-20 | 179 | 238 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 17.787 | 181 | 238 | IPR003657 | WRKY domain |
Pfam | PF03106 | 4.1E-17 | 181 | 235 | IPR003657 | WRKY domain |
Gene3D | G3DSA:2.20.25.80 | 4.2E-30 | 333 | 407 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 31.605 | 342 | 407 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 1.07E-26 | 342 | 407 | IPR003657 | WRKY domain |
SMART | SM00774 | 1.2E-33 | 347 | 406 | IPR003657 | WRKY domain |
Pfam | PF03106 | 3.9E-23 | 349 | 404 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 477 aa Download sequence Send to blast |
METENNLFSH GEIAEGNSIT AHDVDEGNNH CENFDENDEQ QERVSGSNCA GDGACVHSQS 60 ETLTSVQMSD RSTQSDSEKS PEFLAGISEE VPVEYSPQPP QSGGELKNQV NEEPSNCISG 120 QSSQVEVQLP NGESKLEQST TSGKELQAVE NGILTCFKEQ DKQNSPGPKP LSTVPTLKTP 180 DGYNWRKYGQ KQVKSPEGSR SYFRCTFYGC TAKKIECCDR SNRVVEIVYR IHHNHGPPQE 240 VNCTRENNMP ALPIMPISWN QDRTTHLARH YNDSMTSLQV VDQIHETKHQ DSCGSDETTV 300 TNTREEANGP EYKRRQKRSS ERELVSLSET GKKSKCVVYE TGDVGISSDG YRWRKYGQKM 360 VKGSPHPRNY YRCTSSGCPV RKQTERSMDN ASAVVISYKG VHDHDIPLPR KSNGPKSASV 420 SAANLQNNKS EVYPSQTQWS VDKQGQLSGE SFNLGGDKIS ESPKTLLSIE FEIKPR* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
2ayd_A | 1e-23 | 334 | 407 | 1 | 74 | WRKY transcription factor 1 |
Search in ModeBase |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Migut.J01340.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012839864.1 | 0.0 | PREDICTED: probable WRKY transcription factor 32 | ||||
TrEMBL | A0A022R5Q0 | 0.0 | A0A022R5Q0_ERYGU; Uncharacterized protein | ||||
STRING | Migut.J01340.1.p | 0.0 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA9189 | 21 | 27 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G30935.1 | 1e-86 | WRKY DNA-binding protein 32 |
Link Out ? help Back to Top | |
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Phytozome | Migut.J01340.1.p |