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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Migut.J00991.1.p | ||||||||
Common Name | MIMGU_mgv1a025709mg | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
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Family | NAC | ||||||||
Protein Properties | Length: 202aa MW: 23364.2 Da PI: 7.6589 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 126.5 | 2.2e-39 | 6 | 131 | 2 | 127 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 ppG+rF Ptdeel+++yL k+++++l + +vi+ v+ ++ P L + ++kewyfF++r +kya+g+r+nr++ +g+Wka+ dk+++ Migut.J00991.1.p 6 PPGYRFMPTDEELISDYLLTKIDNRPLAA-DVIQVVNFSDHGPDYLSrEYPPVGDKEWYFFTPRIRKYAKGSRPNRTAGNGFWKASCADKDIK 97 9*************************999.99**************844555699************************************** PP NAM 94 skkgelvglkktLvfykg.rapkgektdWvmheyr 127 +++ +g k tLvf++g ++++g ktdW+mhey+ Migut.J00991.1.p 98 F-NNKIIGHKMTLVFHEGiSSKDGIKTDWIMHEYT 131 9.999************989999***********8 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 9.29E-47 | 3 | 158 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 46.135 | 5 | 159 | IPR003441 | NAC domain |
Pfam | PF02365 | 1.5E-23 | 6 | 131 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 202 aa Download sequence Send to blast |
MESKYPPGYR FMPTDEELIS DYLLTKIDNR PLAADVIQVV NFSDHGPDYL SREYPPVGDK 60 EWYFFTPRIR KYAKGSRPNR TAGNGFWKAS CADKDIKFNN KIIGHKMTLV FHEGISSKDG 120 IKTDWIMHEY TAIHPSRNKR DADDNMKLDD WVICRIHKNV SKSSSANKRR ANLLENQQQQ 180 EQVAVGENRQ EEEEQVAVRE N* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3swm_A | 1e-43 | 6 | 168 | 21 | 174 | NAC domain-containing protein 19 |
3swm_B | 1e-43 | 6 | 168 | 21 | 174 | NAC domain-containing protein 19 |
3swm_C | 1e-43 | 6 | 168 | 21 | 174 | NAC domain-containing protein 19 |
3swm_D | 1e-43 | 6 | 168 | 21 | 174 | NAC domain-containing protein 19 |
3swp_A | 1e-43 | 6 | 168 | 21 | 174 | NAC domain-containing protein 19 |
3swp_B | 1e-43 | 6 | 168 | 21 | 174 | NAC domain-containing protein 19 |
3swp_C | 1e-43 | 6 | 168 | 21 | 174 | NAC domain-containing protein 19 |
3swp_D | 1e-43 | 6 | 168 | 21 | 174 | NAC domain-containing protein 19 |
Search in ModeBase |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Migut.J00991.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012840103.1 | 1e-151 | PREDICTED: NAC transcription factor 29-like | ||||
TrEMBL | A0A022R551 | 1e-147 | A0A022R551_ERYGU; Uncharacterized protein (Fragment) | ||||
TrEMBL | A0A022R631 | 1e-147 | A0A022R631_ERYGU; Uncharacterized protein (Fragment) | ||||
STRING | Migut.J00991.1.p | 1e-151 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA14648 | 2 | 10 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G15500.1 | 1e-43 | NAC domain containing protein 3 |
Link Out ? help Back to Top | |
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Phytozome | Migut.J00991.1.p |