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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Migut.J00446.1.p |
Common Name | LOC105952772, MIMGU_mgv1a020315mg |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
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Family |
MYB |
Protein Properties |
Length: 206aa MW: 23790.6 Da PI: 4.5735 |
Description |
MYB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Migut.J00446.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 47.8 | 3.4e-15 | 8 | 55 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
+g+W +eEde+l av+ +G ++W++ a+ g++R +k+c++rw +yl
Migut.J00446.1.p 8 KGPWLEEEDEQLSAAVAVFGDKRWDALAKSSGLRRNGKSCRLRWMNYL 55
79********************************************97 PP
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2 | Myb_DNA-binding | 52.3 | 1.3e-16 | 62 | 106 | 2 | 48 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
g+ +++E+ +++++++++G++ W+ Iar+++ gRt++++k++w++yl
Migut.J00446.1.p 62 GNISADEERIIIQLHEKWGNK-WSMIARRLP-GRTDNEIKNYWRSYL 106
67799****************.*********.*************97 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 206 aa
Download sequence Send
to blast |
MQEVELRKGP WLEEEDEQLS AAVAVFGDKR WDALAKSSGL RRNGKSCRLR WMNYLRPNLK 60 HGNISADEER IIIQLHEKWG NKWSMIARRL PGRTDNEIKN YWRSYLKKKA LALDKECLSS 120 TTNTCLRSEE CETDSPCSVN DEIVGPTTDS SDALDIMLNM TSSPYETRLT EWMMSSNCDK 180 DEFSNYDLCF SDDYATWDFS LWDGE*
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
1gv2_A | 5e-28 | 5 | 110 | 1 | 105 | MYB PROTO-ONCOGENE PROTEIN |
1h88_C | 2e-27 | 5 | 110 | 55 | 159 | MYB PROTO-ONCOGENE PROTEIN |
1h89_C | 2e-27 | 5 | 110 | 55 | 159 | MYB PROTO-ONCOGENE PROTEIN |
1h8a_C | 1e-27 | 5 | 110 | 24 | 128 | MYB TRANSFORMING PROTEIN |
Search in ModeBase |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: Accumulates in etiolated seedlings in dark conditions. {ECO:0000269|PubMed:9839469}. |