PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Migut.J00318.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
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Family | WRKY | ||||||||
Protein Properties | Length: 319aa MW: 35921.7 Da PI: 4.8943 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 100.6 | 9.3e-32 | 134 | 190 | 2 | 58 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnh 58 dDgy+WrKYGqK++k+s++prsYYrCt ++C++kk+vers +d ++++itYeg H h Migut.J00318.1.p 134 DDGYKWRKYGQKSIKNSPNPRSYYRCTNPRCSAKKQVERSVDDSDTLIITYEGLHLH 190 8******************************************************99 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 9.9E-30 | 123 | 190 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 26.9 | 128 | 190 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 1.18E-26 | 129 | 190 | IPR003657 | WRKY domain |
SMART | SM00774 | 1.3E-35 | 133 | 192 | IPR003657 | WRKY domain |
Pfam | PF03106 | 3.2E-25 | 134 | 190 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 319 aa Download sequence Send to blast |
MDELIKLTGG SSTAYEDELV KELFDDVSPF FMQPHHHSLI MESNFIPSTY SQIPSPVYSG 60 PTVEDIETAL SYTNYGIHST FHHEAVSEAD RMLMVNNNNN QNKVNDYYNN NNNNDQSSKY 120 TLRIKSCGNN VMADDGYKWR KYGQKSIKNS PNPRSYYRCT NPRCSAKKQV ERSVDDSDTL 180 IITYEGLHLH FTYPFFFLNN QQQNYPPVKK LKGPPVFESQ IENGFGSPFT PNPDPVQTTG 240 PPAEEVLTGQ PAEQGLLEDM VPLMIRKPAL MMDYSYKYNP ASSNNSSSNS ANNSLDESLP 300 SSPASFDSFP WSPTYLGY* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
2ayd_A | 7e-21 | 132 | 190 | 13 | 71 | WRKY transcription factor 1 |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Migut.J00318.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012831749.1 | 0.0 | PREDICTED: probable WRKY transcription factor 49 | ||||
STRING | Migut.J00318.1.p | 0.0 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA12075 | 21 | 24 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G43290.1 | 6e-43 | WRKY DNA-binding protein 49 |
Link Out ? help Back to Top | |
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Phytozome | Migut.J00318.1.p |