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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Migut.I01197.1.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
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Family |
Trihelix |
Protein Properties |
Length: 355aa MW: 39776.3 Da PI: 9.7832 |
Description |
Trihelix family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Migut.I01197.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | trihelix | 48.8 | 1.9e-15 | 46 | 133 | 1 | 86 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.rergferspk...qCkekwenlnkrykkikegekkrtsessstcpyfdqle 86
+W++ + +Li+a e+ +l+rg+lk+++W++v++ + +++ + ++pk qCk++++ ++k+yk +k+ ++ + s++++fd+l+
Migut.I01197.1.p 46 CWSEAATAVLIDAWGERYLELSRGNLKQKHWKDVADIVcSREDYAKTPKtdiQCKNRIDTVKKKYKTEKAKIASG--GGPSKWRFFDKLD 133
7**********************************976677888777754449********************97..67778******97 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 355 aa
Download sequence Send
to blast |
MEEDDEIQSP TPNGRITVTV ASAPPSNSLT LALPIQPQKT PGREDCWSEA ATAVLIDAWG 60 ERYLELSRGN LKQKHWKDVA DIVCSREDYA KTPKTDIQCK NRIDTVKKKY KTEKAKIASG 120 GGPSKWRFFD KLDVLIGPTP SKSNSTPPPP MDLYQRGVPM GIPVGIRSSS SVLKRPSFDS 180 EDESEPENSA DSSDGLPPDT YNNNNKRGKI QKMEMPTVNN ANGSSSQRRD GGGMRGNGRK 240 NKEESNWANS MKELTRAVLK FGEAYEQAET AKLQQLVEME KQRMKFAKEL ELQRMQYFMK 300 TQMELSQIKN RSSANTNNHH HHHHRRVISN NNNNDANNNN TKKNNNTKNS DSSN*
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Functional Description ? help
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Source |
Description |
UniProt | Transcription regulator that may repress the maturation program during early embryogenesis. {ECO:0000269|PubMed:21330492}. |
Best hit in Arabidopsis thaliana ? help
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Hit ID |
E-value |
Description |
AT3G14180.1 | 3e-57 | sequence-specific DNA binding transcription factors |