PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.I00922.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family ERF
Protein Properties Length: 196aa    MW: 21310.6 Da    PI: 10.4165
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.I00922.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP221.94.4e-074567124
               AP2  1 sgykGVrwdkkrgrWvAeIrdpse 24
                      + y+GVr ++ +g+Wv+eIr p++
  Migut.I00922.1.p 45 PVYRGVRMRS-WGKWVSEIRQPRK 67
                      68*****998.**********854 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541712.55E-54671IPR016177DNA-binding domain
PROSITE profilePS510329.7964682IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.103.2E-104671IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 196 aa     Download sequence    Send to blast
MAESPSSATA TSSDSSSSGW GKINGEEKIE KKRKTRERES GNKHPVYRGV RMRSWGKWVS  60
EIRQPRKKSR ILARNLPPRR RWREGPRRGG SEHQGHSLPR PASLSPQDVQ AAAAKAAAME  120
ELAGFIPSPA SSSAADVSSS EVNDELGEII QLPSLEGRYD GSTGSGTELA VVDSAEGWLQ  180
PPWWASDRDF STTKK*
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.I00922.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012856206.16e-82PREDICTED: LOW QUALITY PROTEIN: ethylene-responsive transcription factor TINY
TrEMBLA0A022Q2S18e-62A0A022Q2S1_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA21224225
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G25810.13e-24ERF family protein