PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.I00573.1.p
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family ZF-HD
Protein Properties Length: 179aa    MW: 19615.7 Da    PI: 7.4676
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.I00573.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer90.61.5e-28865358
       ZF-HD_dimer  3 kvrYkeClkNhAaslGghavDGCgEfmpsegee..gtaaalkCaACgCHRnFHRreve 58
                      + +Y+eCl+NhAaslG++a+DGCgEf+p++++   +   +l+CaACgCHRnFHR+  +
  Migut.I00573.1.p  8 NEMYRECLRNHAASLGSYATDGCGEFTPDDDAAaaAAGGGLNCAACGCHRNFHRKVIV 65
                      678*************************988774334568***************876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF047704.7E-241063IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
PROSITE profilePS5152323.9561163IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
ProDomPD1257741.0E-101162IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
TIGRFAMsTIGR015665.5E-231162IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
SuperFamilySSF466898.05E-1692160IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.602.1E-2694161IPR009057Homeodomain-like
TIGRFAMsTIGR015657.6E-29102160IPR006455Homeodomain, ZF-HD class
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 179 aa     Download sequence    Send to blast
MEGDNSSNEM YRECLRNHAA SLGSYATDGC GEFTPDDDAA AAAAGGGLNC AACGCHRNFH  60
RKVIVTRSSG DVAAEMTEYG GGGSGRRMQQ MAAAYSPEQS SKKRFRTKFT EEQKEKMMGF  120
AEKLEWRLQR KDQEDEIERF CRGVGISRKV FKVWMHNHKN SPSHSSTGGN ASSLTDDQ*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wh7_A7e-201011631678ZF-HD homeobox family protein
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtPutative transcription factor. {ECO:0000250}.
UniProtPutative transcription factor. {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.I00573.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012856219.11e-132PREDICTED: zinc-finger homeodomain protein 5-like
SwissprotA2XLF43e-40ZHD11_ORYSI; Zinc-finger homeodomain protein 11
SwissprotQ10DV53e-40ZHD11_ORYSJ; Zinc-finger homeodomain protein 11
TrEMBLA0A2G9FYN77e-91A0A2G9FYN7_9LAMI; Uncharacterized protein
STRINGMigut.I00573.1.p1e-132(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA118652023
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14440.25e-33homeobox protein 31