PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Migut.I00464.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
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Family | Trihelix | ||||||||
Protein Properties | Length: 96aa MW: 11116.6 Da PI: 8.2437 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 35.8 | 2.1e-11 | 5 | 67 | 2 | 63 |
trihelix 2 WtkqevlaLiearremeerlr.rgklkkplWeevskkmrergferspkqCkekwenlnkrykk 63 W v +L ++ +m e+++ +++l+ +Wee+sk +++g + sp+qCk+k+++++ + + Migut.I00464.1.p 5 WNIPDVSTLFQLCHKMVEDSGlQENLRHLRWEEISKSFHDKGSTFSPQQCKDKFDKIRSTWLA 67 8888899999999998888874689*******************************9987554 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF13837 | 5.1E-9 | 4 | 67 | No hit | No description |
Sequence ? help Back to Top |
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Protein Sequence Length: 96 aa Download sequence Send to blast |
MPAHWNIPDV STLFQLCHKM VEDSGLQENL RHLRWEEISK SFHDKGSTFS PQQCKDKFDK 60 IRSTWLAFYK KRAKVGRESY GLEIDDNTGM LIGGW* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Migut.I00464.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012834209.1 | 5e-64 | PREDICTED: uncharacterized protein LOC105955056 isoform X1 | ||||
Refseq | XP_012834210.1 | 5e-64 | PREDICTED: uncharacterized protein LOC105955056 isoform X1 | ||||
Refseq | XP_012834211.1 | 3e-64 | PREDICTED: uncharacterized protein LOC105955056 isoform X2 | ||||
STRING | Migut.I00464.1.p | 1e-66 | (Erythranthe guttata) |
Link Out ? help Back to Top | |
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Phytozome | Migut.I00464.1.p |