PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.I00345.1.p
Common NameLOC105962780, MIMGU_mgv1a026677mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family CO-like
Protein Properties Length: 395aa    MW: 44316.8 Da    PI: 4.8387
Description CO-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.I00345.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-B_box26.21.7e-081760340
          zf-B_box  3 erkCpeHeekelqlfCedCqqllCedClleeHkg......Htvv 40
                      +r C+ +  k++++fC  ++ +lC++C  + H+       H++v
  Migut.I00345.1.p 17 ARACDSCLVKRARWFCAADDAFLCQSCDASVHSAnqlasrHDRV 60
                      678*****************************657788888776 PP
2CCT70.63.8e-24334377144
               CCT   1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqa 44 
                       Rea++lRYkeKr+tR+F+KkirY++RK +Ae+RpR+KGrFvk++
  Migut.I00345.1.p 334 REARVLRYKEKRRTRLFSKKIRYQVRKLNAENRPRMKGRFVKRP 377
                       9*****************************************86 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5011910.9071562IPR000315B-box-type zinc finger
SMARTSM003364.2E-111562IPR000315B-box-type zinc finger
PfamPF006436.8E-71760IPR000315B-box-type zinc finger
CDDcd000215.53E-91862No hitNo description
PROSITE profilePS5101715.914334376IPR010402CCT domain
PfamPF062032.3E-18334376IPR010402CCT domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005622Cellular Componentintracellular
GO:0005515Molecular Functionprotein binding
GO:0008270Molecular Functionzinc ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 395 aa     Download sequence    Send to blast
MSSDSSKVSN ALGGKSARAC DSCLVKRARW FCAADDAFLC QSCDASVHSA NQLASRHDRV  60
RLDKTSNASP PANAPAWQQG FTTRKARTPR HGKPTTKRLL HEYPPANQLL PPVPEIDAHE  120
DPFAEEDNEG GQFLLYRVPV FDPFGQDFFN EEDANNMLPE HEDDAEGCLD LNLAELLGSC  180
DEDLFAADVD SLLIDEEDCS NINIGLFDHQ DDQNKGIIIN DEFVDGAKRM KVEDDVIAAC  240
NNYEAGEKTK SEEEDMSSRS ESHNNNNMFL RLNYEAVIAA WATKGCPWTN GTPPQFDNLD  300
QFMDEWSGGS SEWCGGRIGG NNNNNNNNNN DAEREARVLR YKEKRRTRLF SKKIRYQVRK  360
LNAENRPRMK GRFVKRPTAF SASNNSLPYN LLHQ*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1344360RRTRLFSKKIRYQVRKL
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.I00345.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012842560.10.0PREDICTED: zinc finger protein CONSTANS-LIKE 16-like
TrEMBLA0A022RZN60.0A0A022RZN6_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA15392470
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G25440.15e-68B-box type zinc finger protein with CCT domain