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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Migut.I00200.1.p |
| Common Name | LOC105959705, MIMGU_mgv1a025627mg |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
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| Family |
NAC |
| Protein Properties |
Length: 319aa MW: 35824.2 Da PI: 6.2656 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Migut.I00200.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 173.2 | 7.8e-54 | 19 | 145 | 1 | 129 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93
lppGfrFhPtdeel+++yL kkv ++++++ +i evd++kvePw+Lp ++k +ekewyfF+ rdkky+tg+r+nrat++gyWkatgkdke++
Migut.I00200.1.p 19 LPPGFRFHPTDEELITQYLSKKVVDSRFTC-VAIGEVDMNKVEPWELPWRAKLGEKEWYFFCIRDKKYPTGQRTNRATAEGYWKATGKDKEIF 110
79*************************999.67***************888999*************************************** PP
NAM 94 skkgelvglkktLvfykgrapkgektdWvmheyrle 129
+ +++lvg+kktLvfykgrapkgek++Wv heyrle
Migut.I00200.1.p 111 R-GKSLVGMKKTLVFYKGRAPKGEKSNWVSHEYRLE 145
*.999*****************************85 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 319 aa
Download sequence Send
to blast |
MMDNRNHEEV KSDDGLINLP PGFRFHPTDE ELITQYLSKK VVDSRFTCVA IGEVDMNKVE 60
PWELPWRAKL GEKEWYFFCI RDKKYPTGQR TNRATAEGYW KATGKDKEIF RGKSLVGMKK 120
TLVFYKGRAP KGEKSNWVSH EYRLEGNFSI LNLPKSSKSD WVISRVFQKA IGGKKVHISG 180
LMNNNQLFDN SSTLPPLMDP AVRPGGGEPP GLVHCFSAAV GGEAAHENFM ADILNNPIFP 240
SSCSSNPMDS FQTFPSWAQY QYPVQPGLQY PGSGSDPRTR FANYSEESPM GTENKVSGED 300
EEDADAIGPQ DLDSMWRY*
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| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1ut4_A | 8e-51 | 6 | 175 | 2 | 171 | NO APICAL MERISTEM PROTEIN |
| 1ut4_B | 8e-51 | 6 | 175 | 2 | 171 | NO APICAL MERISTEM PROTEIN |
| 1ut7_A | 8e-51 | 6 | 175 | 2 | 171 | NO APICAL MERISTEM PROTEIN |
| 1ut7_B | 8e-51 | 6 | 175 | 2 | 171 | NO APICAL MERISTEM PROTEIN |
| 4dul_A | 8e-51 | 6 | 175 | 2 | 171 | NAC domain-containing protein 19 |
| 4dul_B | 8e-51 | 6 | 175 | 2 | 171 | NAC domain-containing protein 19 |
| Search in ModeBase |
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Binds to the promoter regions of genes involved in chlorophyll catabolic processes, such as NYC1, SGR1, SGR2 and PAO. {ECO:0000269|PubMed:27021284}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Repressed by the microRNA miR164. {ECO:0000269|PubMed:15294871, ECO:0000269|PubMed:17098808}. |
