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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Migut.I00176.2.p | ||||||||
Common Name | MIMGU_mgv1a012184mg | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
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Family | MYB_related | ||||||||
Protein Properties | Length: 260aa MW: 28629.3 Da PI: 5.5865 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 34.4 | 5e-11 | 2 | 36 | 12 | 48 |
HHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 12 lvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 ++++ ++lG++ W++Ia++++ Rt++++k++w+++l Migut.I00176.2.p 2 IIHLQALLGNR-WAAIASYLP-ERTDNDIKNYWNTHL 36 5788899****.*********.************996 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00717 | 5.8E-4 | 1 | 38 | IPR001005 | SANT/Myb domain |
PROSITE profile | PS51294 | 19.927 | 1 | 40 | IPR017930 | Myb domain |
Gene3D | G3DSA:1.10.10.60 | 1.6E-15 | 1 | 37 | IPR009057 | Homeodomain-like |
CDD | cd00167 | 3.81E-8 | 1 | 36 | No hit | No description |
Pfam | PF00249 | 1.2E-9 | 2 | 36 | IPR001005 | SANT/Myb domain |
SuperFamily | SSF46689 | 5.07E-10 | 2 | 46 | IPR009057 | Homeodomain-like |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 260 aa Download sequence Send to blast |
MIIHLQALLG NRWAAIASYL PERTDNDIKN YWNTHLKKKL EKQNHHTQNG NHNNSSSSSS 60 SSEHSKSNSK GQWERRLQTD IHTAKQALCD ALSLDKSGPT ISPIDTKLFN VVPQVQTSTY 120 ASSTENIARL LEKWIKKPSN DSSQSASSES TTPSTSFSNN IINNNNNNKN ASVGLISSPS 180 EGAVSTTFLS FNSTNSDFTQ SEYEGKFENG IFRDGSKDNI LETQMPFSLL EKWLLDDAAA 240 QGQDGDFMDM DLVGTADLF* |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor. {ECO:0000305}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Migut.I00176.2.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012839369.1 | 0.0 | PREDICTED: myb-related protein 306 | ||||
Swissprot | P81392 | 9e-78 | MYB06_ANTMA; Myb-related protein 306 | ||||
TrEMBL | A0A022RA95 | 0.0 | A0A022RA95_ERYGU; Uncharacterized protein |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G47600.1 | 2e-38 | myb domain protein 94 |
Link Out ? help Back to Top | |
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Phytozome | Migut.I00176.2.p |
Publications ? help Back to Top | |||
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