PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.I00107.2.p
Common NameLOC105959724, MIMGU_mgv1a008388mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family MYB_related
Protein Properties Length: 366aa    MW: 41303.1 Da    PI: 5.0185
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.I00107.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding331.4e-1066107346
                       SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
   Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                       ++Tt+E+el ++++   G++ W  Ia+ ++ gRt++++k  w++
  Migut.I00107.2.p  66 SFTTQEEELVIQLHSAIGSR-WPIIAQQLP-GRTDNDVKTLWNS 107
                       79******************.*********.********99875 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466891.15E-1342117IPR009057Homeodomain-like
PROSITE profilePS5129414.23459113IPR017930Myb domain
Gene3DG3DSA:1.10.10.601.6E-1562113IPR009057Homeodomain-like
SMARTSM007173.2E-863111IPR001005SANT/Myb domain
PfamPF002494.3E-965107IPR001005SANT/Myb domain
CDDcd001671.12E-566109No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 366 aa     Download sequence    Send to blast
MVKTPPCSDK LQMQKGIWND DGDRERNAAY VPKQDGTGSG QKRSGKNSRE KWHNGNNSKC  60
DPKHKSFTTQ EEELVIQLHS AIGSRWPIIA QQLPGRTDND VKTLWNSKLR KKLSAMGIDP  120
VTHKPFSQIL ADYGNIGAFP KARTRFSSLS KDIKNSIVFK SSNSELISQN PNNNNNNNNI  180
NPHENFSHYF HDHLFSPSPS NISDIAHYNN NNNPLDLYSQ LQSVNFVTKK PDNNNNNLNL  240
AQQQQQQLFV NNECATSSSV NQEFSWSDFF LEDAQLENEG NILVAHECGG GGEKLESEED  300
QVKERYIINE DNNNEINALV DNNNNNTFEA LSSPSNSASS FVEAMIESQD EMFSQLPCFY  360
EEQFY*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1h8a_C1e-141211324128MYB TRANSFORMING PROTEIN
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.I00107.2.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012839314.10.0PREDICTED: myb-related protein 308-like isoform X2
TrEMBLA0A022R8580.0A0A022R858_ERYGU; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G28470.12e-36MYB family protein