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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Migut.H02327.1.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
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Family |
HD-ZIP |
Protein Properties |
Length: 310aa MW: 35514.2 Da PI: 4.4785 |
Description |
HD-ZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Migut.H02327.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Homeobox | 58.7 | 9.4e-19 | 44 | 97 | 3 | 56 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
k+++++ +q+++Le+ Fe ++++ e++ +LA +lgL+ rqV vWFqNrRa++k
Migut.H02327.1.p 44 KKRRLSLHQVKALEKNFEVENKLEPERKVKLAGELGLQPRQVAVWFQNRRARWK 97
5568999**********************************************9 PP
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2 | HD-ZIP_I/II | 123.5 | 1e-39 | 44 | 135 | 2 | 93 |
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93
kkrrls +qvk+LE++Fe e+kLeperKv+la eLglqprqvavWFqnrRAR+ktkqlE+dy Lk+ dalk++ e+L++++e+L +e+ke
Migut.H02327.1.p 44 KKRRLSLHQVKALEKNFEVENKLEPERKVKLAGELGLQPRQVAVWFQNRRARWKTKQLERDYGLLKADRDALKHKYEKLRQDNESLMNEIKE 135
9***************************************************************************************9987 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 310 aa
Download sequence Send
to blast |
MKMSICPNST VDVEENNPMY TRDFQTMLDE EGCVEEYSGH VSDKKRRLSL HQVKALEKNF 60 EVENKLEPER KVKLAGELGL QPRQVAVWFQ NRRARWKTKQ LERDYGLLKA DRDALKHKYE 120 KLRQDNESLM NEIKELKMKL NEDGKPDTKV SVKDENLVVS ETEEKSKLET EYDSEAAMEV 180 NFESFNGDEN EEIGCASFFC DLKDGSSDSD SSAILNDYNS PRHQFLDIHS GGSSSSMNTM 240 SFQFSDSGNK EISASILGDG QKMCQLAQMQ FVKIEEHDFF GDEESDNCSN LFCDDQAPTL 300 HWYSSHDWN*
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